RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 GTF2H3Q13889 308 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 IMPG1Q17R60 797 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 DENND1BQ6P3S1 775 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 C4orf33Q8N1A6 199 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 CARNS1A5YM72 827 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 CFAP99D6REC4 459 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 DIAPH2O60879 1101 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 RPL9P32969 192 aaKnown RBP14.37□□□□□ -0.11
CTR9-201ENST00000361367 HSPA9P38646 679 aaKnown RBP14.37□□□□□ -0.11
CTR9-201ENST00000361367 PTK7Q13308 1070 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 FAM129AQ9BZQ8 928 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 ATXN3LQ9H3M9 355 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 EPS15L1Q9UBC2 864 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 SMG5Q9UPR3 1016 aaKnown RBP14.37□□□□□ -0.11
CTR9-201ENST00000361367 AAR2Q9Y312 384 aaKnown RBP14.37□□□□□ -0.11
CTR9-201ENST00000361367 PKP3Q9Y446 797 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 IPPQ9Y573 584 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 ADCY6O43306 1168 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 ENDOD1O94919 500 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 SLC29A2Q14542 456 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 LRIG3Q6UXM1 1119 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 LRRC52Q8N7C0 313 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 BLOC1S5Q8TDH9 187 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 USP13Q92995 863 aaPredicted RBP14.37□□□□□ -0.11
CTR9-201ENST00000361367 ELMO2Q96JJ3 720 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 POPDC2Q9HBU9 364 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 PCDHA2Q9Y5H9 948 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 RPS6KL1Q9Y6S9 549 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 CALRP27797 417 aaKnown RBP14.37□□□□□ -0.11
CTR9-201ENST00000361367 SIAH1Q8IUQ4 282 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 HERC6Q8IVU3 1022 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 SH2D3CQ8N5H7 860 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 NSMCE4AQ9NXX6 385 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 RGPD1P0DJD0 1748 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 KDM3BQ7LBC6 1761 aa14.37□□□□□ -0.11
CTR9-201ENST00000361367 SNRPAP09012 282 aaKnown RBP14.36□□□□□ -0.11
CTR9-201ENST00000361367 NPR3P17342 541 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 B3GALNT2Q8NCR0 500 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 CBX4O00257 560 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 MIPP30301 263 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 ARL2P36404 184 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 GRIK3Q13003 919 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 PLD1Q13393 1074 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 GBP7Q8N8V2 638 aaPredicted RBP14.36□□□□□ -0.11
CTR9-201ENST00000361367 MRPL17Q9NRX2 175 aaKnown RBP14.36□□□□□ -0.11
CTR9-201ENST00000361367 ZNF112Q9UJU3 913 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 NUDT5Q9UKK9 219 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 CDH9Q9ULB4 789 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 NCAM2O15394 837 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 HIST1H2AGP0C0S8 130 aaPredicted RBP14.36□□□□□ -0.11
CTR9-201ENST00000361367 HIST1H2ADP20671 130 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 FSCBQ5H9T9 825 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 PTRHD1Q6GMV3 140 aaKnown RBP14.36□□□□□ -0.11
CTR9-201ENST00000361367 PALB2Q86YC2 1186 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 CELF6Q96J87 481 aaKnown RBP14.36□□□□□ -0.11
CTR9-201ENST00000361367 HIST1H2AHQ96KK5 128 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 HSFY1Q96LI6 401 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 FGD4Q96M96 766 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 HIST1H2AJQ99878 128 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 H2AFJQ9BTM1 129 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 CIPCQ9C0C6 399 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 TRIM66O15016 1216 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 PJA2O43164 708 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 TOMM70O94826 608 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 RALBP11234 206 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 CCDC15Q0P6D6 951 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 ZRANB3Q5FWF4 1079 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 TFAP2DQ7Z6R9 452 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 CASKIN2Q8WXE0 1202 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 SDCCAG3Q96C92 435 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 TLR10Q9BXR5 811 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 PCMTD2Q9NV79 361 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 TAS2R14Q9NYV8 317 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 ARFGEF2Q9Y6D5 1785 aa14.36□□□□□ -0.11
CTR9-201ENST00000361367 ZNF197O14709 1029 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 TGM2P21980 687 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 WEE1P30291 646 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 MUM1Q2TAK8 710 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 SYTL3Q4VX76 610 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 PPM1LQ5SGD2 360 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 MFSD7Q6UXD7 560 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 PIGZQ86VD9 579 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 PPWD1Q96BP3 646 aaKnown RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 ZBTB10Q96DT7 871 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 TEPSINQ96N21 525 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 MBOAT7Q96N66 472 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 TXNRD2Q9NNW7 524 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 CPSF2Q9P2I0 782 aaKnown RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 DDX20Q9UHI6 824 aaKnown RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 PADI3Q9ULW8 664 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 F8VP50 259 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 PYGLP06737 847 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
CTR9-201ENST00000361367 PAX3P23760 479 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 ARFIP2P53365 341 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 PTK6Q13882 451 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 ACAP1Q15027 740 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 TSHZ1Q6ZSZ6 1077 aa14.35□□□□□ -0.11
CTR9-201ENST00000361367 NT5DC3Q86UY8 548 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms