RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ASTN1O14525 1302 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 TNPO2O14787 897 aaKnown RBP14.4□□□□□ -0.1
SMC5-201ENST00000361138 FCGR1AP12314 374 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 ETS1P14921 441 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 FAM83EQ2M2I3 478 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 OTOAQ7RTW8 1153 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 VCPIP1Q96JH7 1222 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 RTFDC1Q9BY42 306 aaPredicted RBP14.4□□□□□ -0.1
SMC5-201ENST00000361138 MAP3K6O95382 1288 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 NPTXRO95502 500 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 RPL5P46777 297 aaKnown RBP14.4□□□□□ -0.1
SMC5-201ENST00000361138 SLC25A3Q00325 362 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 TBCELQ5QJ74 424 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 PIGWQ7Z7B1 504 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 STKLD1Q8NE28 680 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 RDM1Q8NG50 284 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 SLCO1B3Q9NPD5 702 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 FBXO40Q9UH90 709 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 TSR3Q9UJK0 312 aaKnown RBP14.4□□□□□ -0.1
SMC5-201ENST00000361138 SALL4Q9UJQ4 1053 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 PGM3O95394 542 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 KRR1Q13601 381 aaKnown RBP14.4□□□□□ -0.1
SMC5-201ENST00000361138 KCTD21Q4G0X4 260 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 ECHDC2Q86YB7 292 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 FITM2Q8N6M3 262 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 VGLL2Q8N8G2 317 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 TNIP3Q96KP6 325 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 FAM8A1Q9UBU6 413 aa14.4□□□□□ -0.1
SMC5-201ENST00000361138 NAPEPLDQ6IQ20 393 aa14.4□□□□□ -0.11
SMC5-201ENST00000361138 RTKN2Q8IZC4 609 aa14.4□□□□□ -0.11
SMC5-201ENST00000361138 BHLHE22Q8NFJ8 381 aaPredicted RBP14.4□□□□□ -0.11
SMC5-201ENST00000361138 SGF29Q96ES7 293 aa14.4□□□□□ -0.11
SMC5-201ENST00000361138 PPP1R2P1Q96PQ5 205 aa14.4□□□□□ -0.11
SMC5-201ENST00000361138 UMODL1Q5DID0 1318 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 C5orf60A6NFR6 353 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 NFKBIAP25963 317 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 Q3C1V9 767 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 DPP9Q86TI2 863 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 HORMAD1Q86X24 394 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ULK2Q8IYT8 1036 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ALLCQ8N6M5 410 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ZNF560Q96MR9 790 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 CDRT15Q96T59 188 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 IARS2Q9NSE4 1012 aaKnown RBP14.39□□□□□ -0.11
SMC5-201ENST00000361138 C1orf232A0A0U1RR37 186 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 LIASO43766 372 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ITGA9Q13797 1035 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 C6orf10Q5SRN2 563 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 SV2AQ7L0J3 742 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 SH3TC2Q8TF17 1288 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 DLG3Q92796 817 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 SPATA33Q96N06 139 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 TEKT2Q9UIF3 430 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 SNX9Q9Y5X1 595 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 KANSL1LA0AUZ9 987 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 TRDMT1O14717 391 aaKnown RBP14.39□□□□□ -0.11
SMC5-201ENST00000361138 ACADSBP45954 432 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 GLRBP48167 497 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 MARSP56192 900 aaKnown RBP14.39□□□□□ -0.11
SMC5-201ENST00000361138 FOLH1Q04609 750 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 AAGABQ6PD74 315 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 KYAT3Q6YP21 454 aaKnown RBP14.39□□□□□ -0.11
SMC5-201ENST00000361138 LINC00523Q86TU6 105 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 UNC45BQ8IWX7 931 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 CCDC126Q96EE4 140 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 PWWP2AQ96N64 755 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 TARS2Q9BW92 718 aaKnown RBP14.39□□□□□ -0.11
SMC5-201ENST00000361138 VTI1BQ9UEU0 232 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ARHGAP23Q9P227 1491 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ME2P23368 584 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 GRTP1Q5TC63 336 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ATF7IP2Q5U623 682 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ALYREFQ86V81 257 aaKnown RBP14.39□□□□□ -0.11
SMC5-201ENST00000361138 MICU2Q8IYU8 434 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 THEM5Q8N1Q8 247 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 SEMA6AQ9H2E6 1030 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 KCTD10Q9H3F6 313 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 LRRC40Q9H9A6 602 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 ARL8BQ9NVJ2 186 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 TCHHQ07283 1943 aa14.39□□□□□ -0.11
SMC5-201ENST00000361138 MAGEB2O15479 319 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 NFIXQ14938 502 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 CCDC85BQ15834 202 aaPredicted RBP14.38□□□□□ -0.11
SMC5-201ENST00000361138 TKFCQ3LXA3 575 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 AGAP9Q5VTM2 703 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 EPS8L1Q8TE68 723 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 PHACTR1Q9C0D0 580 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 GPATCH2LQ9NWQ4 482 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 RIC1Q4ADV7 1423 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 FRMPD4Q14CM0 1322 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 DCXO43602 365 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 XIAPP98170 497 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 EN1Q05925 392 aaPredicted RBP14.38□□□□□ -0.11
SMC5-201ENST00000361138 SFSWAPQ12872 951 aaKnown RBP14.38□□□□□ -0.11
SMC5-201ENST00000361138 UBAP2LQ14157 1087 aaKnown RBP14.38□□□□□ -0.11
SMC5-201ENST00000361138 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMC5-201ENST00000361138 ELMO3Q96BJ8 720 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 ATAD3AQ9NVI7 634 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 ADGRA2Q96PE1 1338 aa14.38□□□□□ -0.11
SMC5-201ENST00000361138 MRPS22P82650 360 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms