RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 VCPKMTQ9H867 229 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 CNTNAP4Q9C0A0 1308 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 NKRFO15226 690 aaKnown RBP eCLIP9.98□□□□□ -0.816e-7■■■□□ 16.5
CUX1-203ENST00000360264 NBNO60934 754 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 TMED10P49755 219 aaKnown RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 PHACTR1Q9C0D0 580 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 O00370 1275 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 GLP2RO95838 553 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 COILP38432 576 aaPredicted RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 PSMC6P62333 389 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 CREMQ03060 361 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 DDR2Q16832 855 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 LRRC6Q86X45 466 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 GSPT2Q8IYD1 628 aaKnown RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 TINF2Q9BSI4 451 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 GTF3C4Q9UKN8 822 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 CACNA1BQ00975 2339 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 SPATA31A6Q5VVP1 1343 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 CEP250Q9BV73 2442 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 DCDC2CA8MYV0 355 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 C2CD2LO14523 706 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 INAQ16352 499 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 NDUFA5Q16718 116 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 BNC2Q6ZN30 1099 aaPredicted RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 FHDC1Q9C0D6 1143 aaPredicted RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 SERHL2Q9H4I8 314 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 MROH8Q9H579 483 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 SERHLQ9NQF3 203 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 SAE1Q9UBE0 346 aaPredicted RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 CST8O60676 142 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 TPBGLP0DKB5 382 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 CASP1P29466 404 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 BARGINQ6ZT62 677 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 WDR36Q8NI36 951 aaKnown RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 CENPTQ96BT3 561 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 PPP1R10Q96QC0 940 aaKnown RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 ERP44Q9BS26 406 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.98□□□□□ -0.813e-6■□□□□ 8.8
CUX1-203ENST00000360264 NFIBO00712 420 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 FAM151AQ8WW52 585 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 LONRF1Q17RB8 773 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 PAGE2BQ5JRK9 111 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 LMBRD2Q68DH5 695 aaPredicted RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 BIRC5O15392 142 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 CYP27B1O15528 508 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 ENO2P09104 434 aaPredicted RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 NAMPTP43490 491 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 CDC73Q6P1J9 531 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 TAF2Q6P1X5 1199 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 ISCA1Q9BUE6 129 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 DDIT4Q9NX09 232 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 GALCP54803 685 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 RABL6Q3YEC7 729 aaPredicted RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 ANGEL2Q5VTE6 544 aaKnown RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 ANKRD27Q96NW4 1050 aa9.98□□□□□ -0.81
CUX1-203ENST00000360264 MRPL9Q9BYD2 267 aaKnown RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 CLEC4MQ9H2X3 399 aaPredicted RBP9.98□□□□□ -0.81
CUX1-203ENST00000360264 ITGA8P53708 1063 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 CDC42EP5Q6NZY7 148 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 NSUN4Q96CB9 384 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 SPATA31E1Q6ZUB1 1445 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 E9PBE3 544 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 CYP24A1Q07973 514 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 CCT8L2Q96SF2 557 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 SH3BP4Q9P0V3 963 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 UXTQ9UBK9 157 aaPredicted RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 DDHD2O94830 711 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 ITIH4Q14624 930 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 SLC25A41Q8N5S1 370 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 ZSWIM1Q9BR11 485 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 TLR8Q9NR97 1041 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 THAP1Q9NVV9 213 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 POLG2Q9UHN1 485 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 EP300Q09472 2414 aaPredicted RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 CNOT3O75175 753 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 CYP2A7P20853 494 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 PTPN3P26045 913 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 TCF7P36402 384 aaPredicted RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 SF3B3Q15393 1217 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 RNFT2Q96EX2 444 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 ZNF668Q96K58 619 aaPredicted RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 LSM8O95777 96 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 NFICP08651 508 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 ZNF23P17027 643 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 NMT1P30419 496 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 NKX1-1Q15270 411 aaPredicted RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 MTSS1LQ765P7 747 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 KRT74Q7RTS7 529 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 SPRTNQ9H040 489 aaPredicted RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 MAPRE3Q9UPY8 281 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 PCDHGA4Q9Y5G9 962 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 INTS1Q8N201 2190 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 A0A087WWV3 80 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 NCK2O43639 380 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 STAU1O95793 577 aaKnown RBP9.97□□□□□ -0.81
CUX1-203ENST00000360264 NDUFB10O96000 172 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 ALG11Q2TAA5 492 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 RFX8Q6ZV50 586 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 SLFN11Q7Z7L1 901 aa9.97□□□□□ -0.81
CUX1-203ENST00000360264 RPRD1AQ96P16 312 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms