RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 PARD6BQ9BYG5 372 aa24.24■■□□□ 1.47
SDF4-202ENST00000360001 VNN2O95498 520 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 SOD2P04179 222 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 DESP17661 470 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 MRPS25P82663 173 aaKnown RBP24.23■■□□□ 1.47
SDF4-202ENST00000360001 ZFYVE27Q5T4F4 411 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 PSRC1Q6PGN9 363 aaPredicted RBP24.23■■□□□ 1.47
SDF4-202ENST00000360001 SCN4BQ8IWT1 228 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 TTC9BQ8N6N2 239 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 PRELID2Q8N945 189 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 SCAMP5Q8TAC9 235 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 RIN2Q8WYP3 895 aaPredicted RBP24.23■■□□□ 1.47
SDF4-202ENST00000360001 IRGQQ8WZA9 623 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 NT5C3BQ969T7 300 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 TMEM169Q96HH4 297 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 TBCBQ99426 244 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 OSBPL8Q9BZF1 889 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 DDX47Q9H0S4 455 aaKnown RBP24.23■■□□□ 1.47
SDF4-202ENST00000360001 GOLGA6L10A0A0M3HER8 536 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 MTMR11A4FU01 709 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 C3orf70A6NLC5 250 aaPredicted RBP24.23■■□□□ 1.47
SDF4-202ENST00000360001 RARAP10276 462 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 SYN1P17600 705 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 NOS2P35228 1153 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 SLC5A3P53794 718 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 SLC25A52Q3SY17 297 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 DCAF6Q58WW2 860 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 C8orf74Q6P047 294 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 RNF19BQ6ZMZ0 732 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 FBXO22Q8NEZ5 403 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 HDAC7Q8WUI4 952 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 C8orf48Q96LL4 319 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 NCAPGQ9BPX3 1015 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 SPG21Q9NZD8 308 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 BACE2Q9Y5Z0 518 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 CDY1Q9Y6F8 540 aa24.23■■□□□ 1.47
SDF4-202ENST00000360001 ADAM12O43184 909 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 PRPSAP2O60256 369 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 COPS2P61201 443 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 SMARCB1Q12824 385 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 KLF1Q13351 362 aaPredicted RBP24.22■■□□□ 1.47
SDF4-202ENST00000360001 PSMD5Q16401 504 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 GLE1Q53GS7 698 aaKnown RBP24.22■■□□□ 1.47
SDF4-202ENST00000360001 OTUD1Q5VV17 481 aaPredicted RBP24.22■■□□□ 1.47
SDF4-202ENST00000360001 SYPL2Q5VXT5 272 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 SLC8B1Q6J4K2 584 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 SPOCD1Q6ZMY3 1216 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 CMASQ8NFW8 434 aaPredicted RBP24.22■■□□□ 1.47
SDF4-202ENST00000360001 NPY6RQ99463 290 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 HEMGNQ9BXL5 484 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 CALCOCO1Q9P1Z2 691 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 COL4A4P53420 1690 aaPredicted RBP24.22■■□□□ 1.47
SDF4-202ENST00000360001 TARSL2A2RTX5 802 aaKnown RBP24.22■■□□□ 1.47
SDF4-202ENST00000360001 LRRD1A4D1F6 860 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 CARNS1A5YM72 827 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 LTFP02788 710 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 GPR15P49685 360 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 PITX1P78337 314 aaPredicted RBP24.22■■□□□ 1.47
SDF4-202ENST00000360001 DDR2Q16832 855 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 STRADAQ7RTN6 431 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 SPPL2BQ8TCT7 592 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 HERC2P3Q9BVR0 1158 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 CRISPLD1Q9H336 500 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 MTUS1Q9ULD2 1270 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 NAALADL1Q9UQQ1 740 aa24.22■■□□□ 1.47
SDF4-202ENST00000360001 TRIM66O15016 1216 aa24.21■■□□□ 1.47
SDF4-202ENST00000360001 PTPN7P35236 360 aa24.21■■□□□ 1.47
SDF4-202ENST00000360001 CDKN2BP42772 138 aa24.21■■□□□ 1.47
SDF4-202ENST00000360001 ATXN1P54253 815 aaKnown RBP24.21■■□□□ 1.47
SDF4-202ENST00000360001 ODF2Q5BJF6 829 aa24.21■■□□□ 1.47
SDF4-202ENST00000360001 KIAA1841Q6NSI8 718 aa24.21■■□□□ 1.47
SDF4-202ENST00000360001 CCDC70Q6NSX1 233 aa24.21■■□□□ 1.47
SDF4-202ENST00000360001 SCYL2Q6P3W7 929 aa24.21■■□□□ 1.47
SDF4-202ENST00000360001 BNIPLQ7Z465 357 aa24.21■■□□□ 1.47
SDF4-202ENST00000360001 LINC00271P0C7V0 271 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 RPL17P18621 184 aaKnown RBP24.2■■□□□ 1.46
SDF4-202ENST00000360001 KDELR1P24390 212 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 CETN2P41208 172 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 SULT1E1P49888 294 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 DSG1Q02413 1049 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 CYP1B1Q16678 543 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 SDHAF4Q5VUM1 108 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 C2orf15Q8WU43 125 aaKnown RBP24.2■■□□□ 1.46
SDF4-202ENST00000360001 HERVK_113Q902F9 699 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 HSPH1Q92598 858 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 SLITRK6Q9H5Y7 841 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 DMGDHQ9UI17 866 aaKnown RBP24.2■■□□□ 1.46
SDF4-202ENST00000360001 RAB21Q9UL25 225 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 LAMA2P24043 3122 aaKnown RBP24.2■■□□□ 1.46
SDF4-202ENST00000360001 WDR27A2RRH5 827 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 C2CD2LO14523 706 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 RAD51CO43502 376 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 PHF2O75151 1096 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 ENDOD1O94919 500 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 KRT10P13645 584 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 ROR1Q01973 937 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 TAZQ16635 292 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 BOLA3Q53S33 107 aa24.2■■□□□ 1.46
SDF4-202ENST00000360001 DDX53Q86TM3 631 aaKnown RBP24.2■■□□□ 1.46
SDF4-202ENST00000360001 TEKT4Q8WW24 435 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms