RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 NSL1Q96IY1 281 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 ZCWPW1Q9H0M4 648 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
COL20A1-201ENST00000358894 SNTG2Q9NY99 539 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 SIGLEC16A6NMB1 481 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 H0YGN5 161 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 APOC4-APOC2K7ER74 178 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 APOC2P02655 101 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 EPHB2P29323 1055 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 ART3Q13508 389 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 TEX9Q8N6V9 391 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 HIC2Q96JB3 615 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 LRRC4CQ9HCJ2 640 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 AP4E1Q9UPM8 1137 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 NFS1Q9Y697 457 aa12.71□□□□□ -0.37
COL20A1-201ENST00000358894 NVLO15381 856 aaKnown RBP12.71□□□□□ -0.38
COL20A1-201ENST00000358894 HMGCRP04035 888 aa12.71□□□□□ -0.38
COL20A1-201ENST00000358894 SNAPC2Q13487 334 aa12.71□□□□□ -0.38
COL20A1-201ENST00000358894 DPYSL3Q14195 570 aa12.71□□□□□ -0.38
COL20A1-201ENST00000358894 EFTUD2Q15029 972 aaKnown RBP eCLIP12.71□□□□□ -0.38
COL20A1-201ENST00000358894 PRPF39Q86UA1 669 aaKnown RBP12.71□□□□□ -0.38
COL20A1-201ENST00000358894 APOL2Q9BQE5 337 aa12.71□□□□□ -0.38
COL20A1-201ENST00000358894 NTPCRQ9BSD7 190 aaKnown RBP12.71□□□□□ -0.38
COL20A1-201ENST00000358894 SETD4Q9NVD3 440 aa12.71□□□□□ -0.38
COL20A1-201ENST00000358894 ZNF214Q9UL59 606 aaPredicted RBP12.71□□□□□ -0.38
COL20A1-201ENST00000358894 MYPNQ86TC9 1320 aa12.71□□□□□ -0.38
COL20A1-201ENST00000358894 ZC3H4Q9UPT8 1303 aaKnown RBP12.71□□□□□ -0.38
COL20A1-201ENST00000358894 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.38
COL20A1-201ENST00000358894 TTC36A6NLP5 189 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 M0QYT0 321 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 MTA2O94776 668 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 FARP2O94887 1054 aaPredicted RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 CYP2C8P10632 490 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 CACNB2Q08289 660 aaPredicted RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 UNC45BQ8IWX7 931 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 CXorf38Q8TB03 319 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 TMEM120AQ9BXJ8 343 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 FSD1LQ9BXM9 530 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 C12orf65Q9H3J6 166 aaKnown RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 DHX33Q9H6R0 707 aaKnown RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 CYP3A43Q9HB55 503 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 XAB2Q9HCS7 855 aaKnown RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 ARMCX1Q9P291 453 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 BCAP29Q9UHQ4 241 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 HES2Q9Y543 173 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 RPS6KL1Q9Y6S9 549 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 DFFAO00273 331 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 EEF2KO00418 725 aaKnown RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 AKAP5P24588 427 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 CYP2F1P24903 491 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 ECHS1P30084 290 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 ZNF484Q5JVG2 852 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 MFSD5Q6N075 450 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 C12orf29Q8N999 325 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 HDAC11Q96DB2 347 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 KLRG1Q96E93 195 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 FAM193BQ96PV7 902 aaPredicted RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 NDE1Q9NXR1 346 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 KPNA7A9QM74 516 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 TCF4P15884 667 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 SLC26A2P50443 739 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 PDK2Q15119 407 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 LRRC38Q5VT99 294 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 NOTUMQ6P988 496 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 TRABD2AQ86V40 505 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 KIAA0319LQ8IZA0 1049 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 CYP4X1Q8N118 509 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 AGAP11Q8TF27 550 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 TFB1MQ8WVM0 346 aaKnown RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 CPXM1Q96SM3 734 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 FRMD8P1Q9BZ68 369 aaPredicted RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 VPS33BQ9H267 617 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 GTSE1Q9NYZ3 720 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 A0A1B0GUL6 1792 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 SERPINB3P29508 390 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 BTKQ06187 659 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 RABGAP1LQ5R372 815 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 DLK2Q6UY11 383 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 ARHGAP18Q8N392 663 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 TFAP2BQ92481 460 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 PLEKHA5Q9HAU0 1116 aa12.7□□□□□ -0.38
COL20A1-201ENST00000358894 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.7□□□□□ -0.38
COL20A1-201ENST00000358894 GLI3P10071 1580 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 PABPN1LA6NDY0 278 aaKnown RBP12.69□□□□□ -0.38
COL20A1-201ENST00000358894 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
COL20A1-201ENST00000358894 AVILO75366 819 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 SERPINB9P50453 376 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 RCN1Q15293 331 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 NETO2Q8NC67 525 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 PPWD1Q96BP3 646 aaKnown RBP12.69□□□□□ -0.38
COL20A1-201ENST00000358894 MTBPQ96DY7 904 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 MID2Q9UJV3 735 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 DRG1Q9Y295 367 aaKnown RBP12.69□□□□□ -0.38
COL20A1-201ENST00000358894 CNTNAP1P78357 1384 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 VNN1O95497 513 aa12.69□□□□□ -0.38
COL20A1-201ENST00000358894 CYP1A1P04798 512 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms