RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 AFF4Q9UHB7 1163 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PLCL2Q9UPR0 1127 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 MAPK8IP1Q9UQF2 711 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 IFNAR1P17181 557 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PTGR1Q14914 329 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TCEAL6Q6IPX3 200 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SVOPLQ8N434 492 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 NAT14Q8WUY8 206 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PLEKHA8Q96JA3 519 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 NUDT12Q9BQG2 462 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SPATA16Q9BXB7 569 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ATP10BO94823 1461 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PALMO75781 387 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 MTHFD1P11586 935 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 COLEC12Q5KU26 742 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PROSER1Q86XN7 944 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TMEM121Q9BTD3 319 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 MLXIPQ9HAP2 919 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 NLRC4Q9NPP4 1024 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TLR7Q9NYK1 1049 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 LRWD1Q9UFC0 647 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 IDNKQ5T6J7 187 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 DHX40Q8IX18 779 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 COPS7BQ9H9Q2 264 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ATE1O95260 518 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 UQCRC1P31930 480 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 KRT31Q15323 416 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 VWA5B1Q5TIE3 1220 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SSH3Q8TE77 659 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 FBXO9Q9UK97 447 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 NESP48681 1621 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ELF3P78545 371 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 NME9Q86XW9 330 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SCGB3A2Q96PL1 93 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 CCSER1Q9C0I3 900 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TCF7L2Q9NQB0 619 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 KBTBD4Q9NVX7 518 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 CDH7Q9ULB5 785 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 V9GY48 417 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TBX3O15119 743 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 GZMAP12544 262 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ALDH9A1P49189 494 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 KCTD6Q8NC69 237 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PJA1Q8NG27 643 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SETD6Q8TBK2 473 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TEX47Q8TBZ9 253 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SH3RF3Q8TEJ3 882 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 HEATR9A2RTY3 570 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TARSP26639 723 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TMBIM6P55061 237 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ZBTB6Q15916 424 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TMC4Q7Z404 712 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 MPP5Q8N3R9 675 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 LNX2Q8N448 690 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 DPP10Q8N608 796 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ASAP3Q8TDY4 903 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 E2F7Q96AV8 911 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 CAMKK2Q96RR4 588 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PAIP1Q9H074 479 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 WDR64B1ANS9 1081 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SLC26A3P40879 764 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 IST1P53990 364 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PLIN5Q00G26 463 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 LRRC24Q50LG9 513 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TTMPQ5BVD1 217 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TMEM35BQ8NCS4 154 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 AP2M1Q96CW1 435 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ACCSQ96QU6 501 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 DDX50Q9BQ39 737 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PCDH10Q9P2E7 1040 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 KDM5AP29375 1690 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ATP6V1G1O75348 118 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ALADP13716 330 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 OSBPP22059 807 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 POLR2FP61218 127 aaKnown RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 VAC14Q08AM6 782 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SMCO1Q147U7 214 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ZMYND11Q15326 602 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PIK3AP1Q6ZUJ8 805 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 AZI2Q9H6S1 392 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 MAT2BQ9NZL9 334 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 SERTAD1Q9UHV2 236 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PXDNLA1KZ92 1463 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 FAM95CA0A1B0GW59 222 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ZNF197O14709 1029 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TCEA3O75764 348 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 ATF3P18847 181 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TRAPPC13A5PLN9 417 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PHF20L1A8MW92 1017 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 TEX28O15482 410 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 FDFT1P37268 417 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 CD79BP40259 229 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 GLMNQ92990 594 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 CD93Q9NPY3 652 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 PDE2AO00408 941 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 GPIP06744 558 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 FDX1P10109 184 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 AMPD2Q01433 879 aa4.81□□□□□ -1.64
SYNE2-203ENST00000357395 NAA30Q147X3 362 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-203ENST00000357395 C11orf91Q3C1V1 193 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms