RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 EPS8L3Q8TE67 593 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 CYLDQ9NQC7 956 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 CST8O60676 142 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 RPS7P62081 194 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 SMAD1Q15797 465 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 FUT11Q495W5 492 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 BOLA3Q53S33 107 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 BNIPLQ7Z465 357 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 YTHDF3Q7Z739 585 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 CPA5Q8WXQ8 436 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 UGT2B28Q9BY64 529 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 WWOXQ9NZC7 414 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 DUSP12Q9UNI6 340 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 SPATA31A3Q5VYP0 1347 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 FAM196BA6NMK8 535 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 FOXN1O15353 648 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 IDH3BO43837 385 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 S100A1P23297 94 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 JAK1P23458 1154 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 MRNIPQ6NTE8 343 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 CDC73Q6P1J9 531 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 PMF1Q6P1K2 205 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 FAM81AQ8TBF8 368 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 NARS2Q96I59 477 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 SEPT5Q99719 369 aaPredicted RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 TRIM10Q9UDY6 481 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 TRMT6Q9UJA5 497 aaKnown RBP13.25□□□□□ -0.29
SMC4-202ENST00000357388 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
SMC4-202ENST00000357388 EFCAB10A6NFE3 127 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 LDLRP01130 860 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 LRG1P02750 347 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 CCNA2P20248 432 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 ATP4AP20648 1035 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 CENPAP49450 140 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 SPIRE1Q08AE8 756 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 MAD2L1Q13257 205 aaPredicted RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 OTOAQ7RTW8 1153 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 RNF180Q86T96 592 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 SLC26A11Q86WA9 606 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 SLITRK2Q9H156 845 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 TMEM8AQ9HCN3 771 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 SPASTQ9UBP0 616 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 C15orf38-AP3S2A0A0A6YYH1 394 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 UPP2O95045 317 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 HLFQ16534 295 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 GSTA3Q16772 222 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 ARPINQ7Z6K5 226 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 C1orf131Q8NDD1 294 aaKnown RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 TFB1MQ8WVM0 346 aaKnown RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 ZNF668Q96K58 619 aaPredicted RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 MAN1C1Q9NR34 630 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 GGA2Q9UJY4 613 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 METP08581 1390 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 RAB25P57735 213 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 TRAF2Q12933 501 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 CCDC153Q494R4 210 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 DHFR2Q86XF0 187 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 WDR48Q8TAF3 677 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 SLC7A14Q8TBB6 771 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 CENPTQ96BT3 561 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 MLPHQ9BV36 600 aaPredicted RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 DDX18Q9NVP1 670 aaKnown RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 POLG2Q9UHN1 485 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 A0A0A6YYK5 440 aaPredicted RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 H3BMM5 538 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 ATG7O95352 703 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 HSMCR30P0CW71 290 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 CCDC130P13994 396 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 CHI3L1P36222 383 aaPredicted RBP13.24□□□□□ -0.29
SMC4-202ENST00000357388 CPT1AP50416 773 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 MTMR2Q13614 643 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 DGKKQ5KSL6 1271 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 STRIP1Q5VSL9 837 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 ADAM33Q9BZ11 813 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 NCKIPSDQ9NZQ3 722 aa13.24□□□□□ -0.29
SMC4-202ENST00000357388 LIN7AO14910 233 aaPredicted RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 ENTPD3O75355 529 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 TNFRSF21O75509 655 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 MPOP05164 745 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 CTSHP09668 335 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 MGAT5BQ3V5L5 792 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 KLHDC7AQ5VTJ3 777 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 DHRSXQ8N5I4 330 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 SLC30A5Q8TAD4 765 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 CAPSLQ8WWF8 208 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 KIFC1Q9BW19 673 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 GJB4Q9NTQ9 266 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 DRG1Q9Y295 367 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 PCDHB7Q9Y5E2 793 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 DYRK3O43781 588 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 SUPT7LO94864 414 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 TYW3Q6IPR3 259 aaKnown RBP13.23□□□□□ -0.29
SMC4-202ENST00000357388 NSMCE2Q96MF7 247 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 GLT1D1Q96MS3 346 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 TMEM260Q9NX78 707 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 RNF112Q9ULX5 631 aa13.23□□□□□ -0.29
SMC4-202ENST00000357388 KDM6AO15550 1401 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms