RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 WDR44Q5JSH3 913 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 SCARA5Q6ZMJ2 495 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 HELQQ8TDG4 1101 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 SNX27Q96L92 541 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 C11orf49Q9H6J7 331 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 CYLDQ9NQC7 956 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 PRDM5Q9NQX1 630 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 NXF1Q9UBU9 619 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 EDF1O60869 148 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 DCTN3O75935 186 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 ATP6V1C1P21283 382 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 POLR2BP30876 1174 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 BFSP2Q13515 415 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 SNX1Q13596 522 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 GPNMBQ14956 572 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 CLEC16AQ2KHT3 1053 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 ANO7Q6IWH7 933 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 ANKS1BQ7Z6G8 1248 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 RTN4RL1Q86UN2 441 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 DBF4BQ8NFT6 615 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 C10orf82Q8WW14 230 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 ATG4AQ8WYN0 398 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 ERP27Q96DN0 273 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 FAM81BQ96LP2 452 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 GAD1Q99259 594 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 ASB7Q9H672 318 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 C1orf112Q9NSG2 853 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 SIX4Q9UIU6 781 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 NUB1Q9Y5A7 615 aa13.25□□□□□ -0.29
RTFDC1-202ENST00000357348 PDCD11Q14690 1871 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 SMIM28A0A1B0GU29 152 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 PPEF2O14830 753 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 GM2AP17900 193 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 RRM1P23921 792 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 KLRC2P26717 231 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 PDK4Q16654 411 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 KYAT1Q16773 422 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 SGSM1Q2NKQ1 1148 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 ANKRD33Q7Z3H0 272 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 ZCCHC9Q8N567 271 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 CCDC89Q8N998 374 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 LRRC37BQ96QE4 947 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 CHST12Q9NRB3 414 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 DPP3Q9NY33 737 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 PHTF1Q9UMS5 762 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 R3HDM2Q9Y2K5 976 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 RALGAPA2Q2PPJ7 1873 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 RASA4BC9J798 803 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 RASA4O43374 803 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 FESP07332 822 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 UNGP13051 313 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 ACADSP16219 412 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 CD58P19256 250 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 ADCY8P40145 1251 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 SPARCL1Q14515 664 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 VSIG1Q86XK7 387 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 ZNF398Q8TD17 642 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 PWWP2AQ96N64 755 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 KIF9Q9HAQ2 790 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 SPATS2LQ9NUQ6 558 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 TMEM39AQ9NV64 488 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 SENP1Q9P0U3 644 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 LNPEPQ9UIQ6 1025 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 POLIQ9UNA4 740 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 SMG5Q9UPR3 1016 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 INPP5FQ9Y2H2 1132 aa13.24□□□□□ -0.29
RTFDC1-202ENST00000357348 HNRNPCL1O60812 293 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 KRT5P13647 590 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 CDC25CP30307 473 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 RAP1GAPP47736 663 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 MRPS35P82673 323 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 ENPEPQ07075 957 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 TCTN1Q2MV58 587 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 WDR72Q3MJ13 1102 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 ZNF394Q53GI3 561 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 ALKAL1Q6UXT8 129 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 AGMOQ6ZNB7 445 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 TBC1D10AQ9BXI6 508 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 OSBPL1AQ9BXW6 950 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 DNAJC17Q9NVM6 304 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 TDRD15B5MCY1 1934 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 AHCYL1O43865 530 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 POMCP01189 267 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 WEE2P0C1S8 567 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 MYBL1P10243 752 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 ALDH3A1P30838 453 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 MAGEA4P43358 317 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 RASSF2P50749 326 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 SCNN1GP51170 649 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 AP3M2P53677 418 aa13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 SOX4Q06945 474 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-202ENST00000357348 DSC3Q14574 896 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms