RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 DDX3XO00571 662 aaKnown RBP eCLIP16.32■□□□□ 0.27e-7■■□□□ 13.9
TRIM13-201ENST00000356017 TADA3O75528 432 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 PLEKP08567 350 aaPredicted RBP16.32■□□□□ 0.2
TRIM13-201ENST00000356017 RALAP11233 206 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 GJA1P17302 382 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 TOGARAM2Q6ZUX3 1019 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 TADA2BQ86TJ2 420 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 NPAS3Q8IXF0 933 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 ING5Q8WYH8 240 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 VCPIP1Q96JH7 1222 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 CDK5RAP1Q96SZ6 601 aaKnown RBP16.32■□□□□ 0.2
TRIM13-201ENST00000356017 ADAM22Q9P0K1 906 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 PRKAG3Q9UGI9 489 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 NAGPAQ9UK23 515 aa16.32■□□□□ 0.2
TRIM13-201ENST00000356017 PAPSS1O43252 624 aaPredicted RBP16.31■□□□□ 0.2
TRIM13-201ENST00000356017 ERBB2P04626 1255 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 CALB1P05937 261 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 GLI1P08151 1106 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 CEBPBP17676 345 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
TRIM13-201ENST00000356017 YWHAGP61981 247 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRIM13-201ENST00000356017 CYP4F8P98187 520 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 C1QBPQ07021 282 aaKnown RBP16.31■□□□□ 0.2
TRIM13-201ENST00000356017 EFHC1Q5JVL4 640 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 HECTD3Q5T447 861 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 GPR158Q5T848 1215 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 TXNDC8Q6A555 127 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 MMS22LQ6ZRQ5 1243 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 PLCD3Q8N3E9 789 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 ASB2Q96Q27 587 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 NHEJ1Q9H9Q4 299 aaPredicted RBP16.31■□□□□ 0.2
TRIM13-201ENST00000356017 ABCC13Q9NSE7 274 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 WDR35Q9P2L0 1181 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 PATJQ8NI35 1801 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 BRWD1Q9NSI6 2320 aa16.31■□□□□ 0.2
TRIM13-201ENST00000356017 A0A1W2PQH9 124 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 YJEFN3A6XGL0 299 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 E7ENQ6 273 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 AKR1B10O60218 316 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 RTN2O75298 545 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 LAMP2P13473 410 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 IL9P15248 144 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 SCNN1AP37088 669 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 AVPR1AP37288 418 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 KCNQ1P51787 676 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 ZNF268Q14587 947 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 SLC18A3Q16572 532 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 BSPRYQ5W0U4 402 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 BTBD8Q5XKL5 378 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 OR6B2Q6IFH4 312 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 SCD5Q86SK9 330 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 MAB21L3Q8N8X9 362 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 TDRD5Q8NAT2 981 aaKnown RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 MCRS1Q96EZ8 462 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 CHP1Q99653 195 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 TRPC7Q9HCX4 862 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 ASNSD1Q9NWL6 643 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 C2orf16Q68DN1 1984 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 PRUNE2Q8WUY3 3088 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 GREB1Q4ZG55 1949 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 A0A087X0T9 212 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 TRAV19A0A0A6YYK7 116 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 TLR5O60602 858 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 OAS1P00973 400 aaKnown RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 LTFP02788 710 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 FTLP02792 175 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 FAM228BP0C875 321 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 HDCP19113 662 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 WEE1P30291 646 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 YWHAZP63104 245 aaKnown RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 SLC6A3Q01959 620 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 ALKBH5Q6P6C2 394 aaKnown RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 KLHDC10Q6PID8 442 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 OLFML1Q6UWY5 402 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 FAM183BPQ6ZVS7 135 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 BEND5Q7L4P6 421 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 BHLHA9Q7RTU4 235 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 TMTC1Q8IUR5 882 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 CCDC170Q8IYT3 715 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 CMTM8Q8IZV2 173 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 CLEC4CQ8WTT0 213 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 FAM149B1Q96BN6 582 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 TRIM11Q96F44 468 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 C11orf70Q9BRQ4 267 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 SLC46A2Q9BY10 475 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 NACA2Q9H009 215 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 ISCUQ9H1K1 167 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 NMUR1Q9HB89 426 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 POPDC2Q9HBU9 364 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 OLA1Q9NTK5 396 aaKnown RBP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
TRIM13-201ENST00000356017 EPS15L1Q9UBC2 864 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 TJP2Q9UDY2 1190 aa16.3■□□□□ 0.2
TRIM13-201ENST00000356017 COL6A3P12111 3177 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
TRIM13-201ENST00000356017 TMCO5BA8MYB1 307 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms