RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GNG14A0A1W2PPG7 69 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 GRK3P35626 688 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 IL5RAQ01344 420 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 SCARF1Q14162 830 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 DGKDQ16760 1214 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 NMD3Q96D46 503 aaKnown RBP15.34■□□□□ 0.05
LMX1B-201ENST00000355497 DCLRE1BQ9H816 532 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 MRPL39Q9NYK5 338 aaKnown RBP15.34■□□□□ 0.05
LMX1B-201ENST00000355497 UBAP1Q9NZ09 502 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 DYTNA2CJ06 578 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 FKBP6O75344 327 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 PBLDP30039 288 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-201ENST00000355497 VAC14Q08AM6 782 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 SNAPC2Q13487 334 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 DGKKQ5KSL6 1271 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 IZUMO2Q6UXV1 221 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 ZBTB49Q6ZSB9 765 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 TMEM26Q6ZUK4 368 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 B3GALNT2Q8NCR0 500 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 MYCBPAPQ8TBZ2 947 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 ERGIC2Q96RQ1 377 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 TMEM79Q9BSE2 394 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 DAPK2Q9UIK4 370 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 ARHGEF5Q12774 1597 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 IQCA1LA6NCM1 817 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 RRN3P2A6NIE6 340 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 NDUFB5O43674 189 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 RPA1P27694 616 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 RAD23AP54725 363 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 KCNMA1Q12791 1236 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 TAF1CQ15572 869 aaPredicted RBP15.34■□□□□ 0.05
LMX1B-201ENST00000355497 TRIM63Q969Q1 353 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 FAM120BQ96EK7 910 aaKnown RBP15.34■□□□□ 0.05
LMX1B-201ENST00000355497 EMILIN2Q9BXX0 1053 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 ROGDIQ9GZN7 287 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 CLPBQ9H078 707 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 UBQLN1Q9UMX0 589 aaKnown RBP15.34■□□□□ 0.05
LMX1B-201ENST00000355497 LAMC1P11047 1609 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 RASA2Q15283 850 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 HOMEZQ8IX15 550 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 FAM220BPB1ANY3 271 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 YWHAQP27348 245 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 ATP12AP54707 1039 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 OXCT1P55809 520 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 DDR2Q16832 855 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 TFDP3Q5H9I0 405 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 FAM117BQ6P1L5 589 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 KLHL24Q6TFL4 600 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 STRA8Q7Z7C7 330 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 EPHX4Q8IUS5 362 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 PAFAH2Q99487 392 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 PACSIN1Q9BY11 444 aa15.34■□□□□ 0.05
LMX1B-201ENST00000355497 CAPN1P07384 714 aa15.33■□□□□ 0.05
LMX1B-201ENST00000355497 PSMB9P28065 219 aa15.33■□□□□ 0.05
LMX1B-201ENST00000355497 MTDHQ86UE4 582 aaKnown RBP15.33■□□□□ 0.05
LMX1B-201ENST00000355497 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.05
LMX1B-201ENST00000355497 DUSP12Q9UNI6 340 aa15.33■□□□□ 0.05
LMX1B-201ENST00000355497 H7C4K7 107 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 ZBTB22O15209 634 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 KLHL41O60662 606 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 SGPL1O95470 568 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 SLC25A27O95847 323 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 ITGALP20701 1170 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 CSNK2BP67870 215 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 TBCELQ5QJ74 424 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 MIEF2Q96C03 454 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 ZBTB10Q96DT7 871 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 PPP1R3GB7ZBB8 358 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 ASNA1O43681 348 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 CRTAMO95727 393 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 CLTBP09497 229 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 FAM58BPP0C7Q3 252 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 SFSWAPQ12872 951 aaKnown RBP15.33■□□□□ 0.04
LMX1B-201ENST00000355497 NDUFA5Q16718 116 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 C16orf86Q6ZW13 317 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 MICALL2Q8IY33 904 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 OSBPL6Q9BZF3 934 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 TM9SF1O15321 606 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 PEX1O43933 1283 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 ITGAXP20702 1163 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 CPT1AP50416 773 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 GSTA3Q16772 222 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 PDZK1Q5T2W1 519 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 SLC22A9Q8IVM8 553 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 CDK20Q8IZL9 346 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 SVOPQ8N4V2 548 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.33■□□□□ 0.04
LMX1B-201ENST00000355497 ATG4AQ8WYN0 398 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 UBXN6Q9BZV1 441 aa15.33■□□□□ 0.04
LMX1B-201ENST00000355497 SMIM31A0A1B0GVY4 71 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 TGM3Q08188 693 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 ZCCHC8Q6NZY4 707 aaKnown RBP15.32■□□□□ 0.04
LMX1B-201ENST00000355497 AHI1Q8N157 1196 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 FICDQ9BVA6 458 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 PLA2G6O60733 806 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 AP1G2O75843 785 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 PTPN4P29074 926 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 XRRA1Q6P2D8 792 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 SLFN11Q7Z7L1 901 aa15.32■□□□□ 0.04
LMX1B-201ENST00000355497 OVOS2A0A0G2JMS6 1433 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms