RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CDH16O75309 829 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 BACE1P56817 501 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 TFAMQ00059 246 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 GAD2Q05329 585 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 PPIDQ08752 370 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 SPARCL1Q14515 664 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 PSMD6Q15008 389 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 TRIP10Q15642 601 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 CCNG2Q16589 344 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 XKR3Q5GH77 459 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 TMCO4Q5TGY1 634 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 TMEM214Q6NUQ4 689 aaKnown RBP9.76□□□□□ -0.85
SMG6-202ENST00000354901 KLHL35Q6PF15 583 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 C15orf39Q6ZRI6 1047 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 MICALL2Q8IY33 904 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 FEZF2Q8TBJ5 459 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 GCNAQ96QF7 691 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 NDEL1Q9GZM8 345 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 ZNF302Q9NR11 478 aa9.76□□□□□ -0.85
SMG6-202ENST00000354901 KIAA1217Q5T5P2 1943 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 MYH9P35579 1960 aaKnown RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 TMEM247A6NEH6 219 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 MAN1A1P33908 653 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 MYL6P60660 151 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 DLG1Q12959 904 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 MKRN3Q13064 507 aaKnown RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 KLF1Q13351 362 aaPredicted RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 TNFAIP8L3Q5GJ75 292 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 DNAJC24Q6P3W2 148 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 ABHD15Q6UXT9 468 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 B3GNT6Q6ZMB0 384 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 RIPOR1Q6ZS17 1223 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 SLC15A3Q8IY34 581 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 THNSL1Q8IYQ7 743 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 SLC35B4Q969S0 331 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 HAPLN3Q96S86 360 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 STX18Q9P2W9 335 aaKnown RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 TJP2Q9UDY2 1190 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 GMEB1Q9Y692 573 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 NUMBLQ9Y6R0 609 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 SUPT20HL2P0C7V6 817 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 KITP10721 976 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 CDK4P11802 303 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 SERPINB8P50452 374 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 YARSP54577 528 aaKnown RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 NRLP54845 237 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 ATP1A4Q13733 1029 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 PKN2Q16513 984 aaKnown RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 SUPT20HL1Q3ZLR7 823 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 C1orf228Q6PIY5 440 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 DLK2Q6UY11 383 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 OTOAQ7RTW8 1153 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 WDR75Q8IWA0 830 aaKnown RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 SLC7A5P1Q8MH63 180 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 ANKRD35Q8N283 1001 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 GIPC3Q8TF64 312 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 GRAMD1AQ96CP6 724 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 PPP1R16BQ96T49 567 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 SENP7Q9BQF6 1050 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 C17orf75Q9HAS0 396 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 LOXHD1Q8IVV2 1947 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 FZD9O00144 591 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 NFKBIEO00221 500 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 KRT19P08727 400 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 COL6A2P12110 1019 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 NELFEP18615 380 aaKnown RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 RPA3P35244 121 aaPredicted RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 HALP42357 657 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 AQP4P55087 323 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 OGDHQ02218 1023 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 GPAT2Q6NUI2 795 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 KLHDC10Q6PID8 442 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 IFNLR1Q8IU57 520 aaPredicted RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 LRRC71Q8N4P6 559 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 POU5F2Q8N7G0 328 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 FBXO27Q8NI29 283 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 SLCO2A1Q92959 643 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 MRPL1Q9BYD6 325 aaKnown RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 CYP4F11Q9HBI6 524 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 PARVAQ9NVD7 372 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 MARCOQ9UEW3 520 aaPredicted RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 PCSK1NQ9UHG2 260 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 ZNF214Q9UL59 606 aaPredicted RBP9.75□□□□□ -0.85
SMG6-202ENST00000354901 RABL2BQ9UNT1 228 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 AGTPBP1Q9UPW5 1226 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 AK5Q9Y6K8 562 aa9.75□□□□□ -0.85
SMG6-202ENST00000354901 PIK3R2O00459 728 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PSTPIP1O43586 416 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 ZC3H11AO75152 810 aaKnown RBP eCLIP9.74□□□□□ -0.85
SMG6-202ENST00000354901 CLPTM1O96005 669 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 GSTT2P0CG29 244 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 GSTT2BP0CG30 244 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 ASPHQ12797 758 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 PDIA2Q13087 525 aaKnown RBP9.74□□□□□ -0.85
SMG6-202ENST00000354901 CYTH1Q15438 398 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 ZNF568Q3ZCX4 644 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 TMEM63BQ5T3F8 832 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 LVRNQ6Q4G3 990 aa9.74□□□□□ -0.85
SMG6-202ENST00000354901 ZNF677Q86XU0 584 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms