RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 BAP1Q92560 729 aa10.34□□□□□ -0.75
MRPL55-204ENST00000348259 SENP8Q96LD8 212 aa10.34□□□□□ -0.75
MRPL55-204ENST00000348259 PCMTD1Q96MG8 357 aaPredicted RBP10.34□□□□□ -0.75
MRPL55-204ENST00000348259 HHIPQ96QV1 700 aa10.34□□□□□ -0.75
MRPL55-204ENST00000348259 TSPAN18Q96SJ8 248 aa10.34□□□□□ -0.75
MRPL55-204ENST00000348259 TCHPQ9BT92 498 aa10.34□□□□□ -0.75
MRPL55-204ENST00000348259 EBF3Q9H4W6 596 aa10.34□□□□□ -0.75
MRPL55-204ENST00000348259 MMRN2Q9H8L6 949 aa10.34□□□□□ -0.75
MRPL55-204ENST00000348259 ZNHIT6Q9NWK9 470 aaKnown RBP10.34□□□□□ -0.75
MRPL55-204ENST00000348259 GON4LQ3T8J9 2241 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 HELZ2Q9BYK8 2649 aaKnown RBP10.33□□□□□ -0.76
MRPL55-204ENST00000348259 SRRM3A6NNA2 597 aaPredicted RBP10.33□□□□□ -0.76
MRPL55-204ENST00000348259 C4orf47A7E2U8 309 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 ANKRD63C9JTQ0 380 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 DPYSL4O14531 572 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 LDHAP00338 332 aaKnown RBP10.33□□□□□ -0.76
MRPL55-204ENST00000348259 HARSP12081 509 aaKnown RBP10.33□□□□□ -0.76
MRPL55-204ENST00000348259 CEACAM1P13688 526 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 ARSAP15289 507 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 SPINK2P20155 84 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 DRD1P21728 446 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 PAX3P23760 479 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 PON1P27169 355 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 GTF2H1P32780 548 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 FMO5P49326 533 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 TUFMP49411 452 aaKnown RBP10.33□□□□□ -0.76
MRPL55-204ENST00000348259 KLK7P49862 253 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 GALK1P51570 392 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 GRSF1Q12849 480 aaKnown RBP eCLIP10.33□□□□□ -0.76
MRPL55-204ENST00000348259 EXOC3L4Q17RC7 722 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 GAB4Q2WGN9 574 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 FBXO43Q4G163 708 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 ARHGAP15Q53QZ3 475 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 C9orf57Q5W0N0 161 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 SMYD5Q6GMV2 418 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 SLC39A4Q6P5W5 647 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 WDR59Q6PJI9 974 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 ZNF662Q6ZS27 426 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 FMNL3Q8IVF7 1028 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 KIF12Q96FN5 646 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 CBWD1Q9BRT8 395 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 IKZF4Q9H2S9 585 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 KIF9Q9HAQ2 790 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 ANKFY1Q9P2R3 1169 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 SLC8A2Q9UPR5 921 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 ADAMTS20P59510 1910 aa10.33□□□□□ -0.76
MRPL55-204ENST00000348259 ASH1LQ9NR48 2969 aaKnown RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 MYO18AQ92614 2054 aaKnown RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 HNRNPDLO14979 420 aaKnown RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 CLDN3O15551 220 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 APBB3O95704 486 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 CCDC175P0C221 793 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 HAPLN1P10915 354 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 ODC1P11926 461 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 DDX6P26196 483 aaKnown RBP eCLIP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 VAMP7P51809 220 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 CLDN10P78369 228 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 USP4Q13107 963 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 ZNF77Q15935 545 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 SNRNP35Q16560 246 aaKnown RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 SH3PXD2AQ5TCZ1 1133 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 KLHDC7AQ5VTJ3 777 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 RAD9BQ6WBX8 426 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 REXO1L1PQ8IX06 675 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 GPD1LQ8N335 351 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 C17orf53Q8N3J3 647 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 OLIG1Q8TAK6 271 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 C2orf15Q8WU43 125 aaKnown RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 PPP1R13BQ96KQ4 1090 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 GANQ9H2C0 597 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 ECT2Q9H8V3 914 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 FAM207AQ9NSI2 230 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 TDP1Q9NUW8 608 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 THG1LQ9NWX6 298 aaKnown RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 AIPL1Q9NZN9 384 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 CPSF3Q9UKF6 684 aaKnown RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 PPP2R2CQ9Y2T4 447 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 ADGRG1Q9Y653 693 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 EPN1Q9Y6I3 576 aaPredicted RBP10.32□□□□□ -0.76
MRPL55-204ENST00000348259 ADAMTS9Q9P2N4 1935 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 BPTFQ12830 3046 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 MYOFQ9NZM1 2061 aa10.32□□□□□ -0.76
MRPL55-204ENST00000348259 PLXNB3Q9ULL4 1909 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 A0A0B4J269 797 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 SSU72P8A0A1W2PR75 194 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 FAM221BA6H8Z2 402 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 ANTXRLA6NF34 631 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 SOWAHDA6NJG2 315 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 USP27XA6NNY8 438 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 PATE3B3GLJ2 98 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 TISP43B9A030 160 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 EPHB6O15197 1021 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 OGTO15294 1046 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 RHOBTB1O94844 696 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 LCA5LO95447 670 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 NFICP08651 508 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 HNRNPLP14866 589 aaKnown RBP eCLIP10.31□□□□□ -0.76
MRPL55-204ENST00000348259 UCHL3P15374 230 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 TCF3P15923 654 aa10.31□□□□□ -0.76
MRPL55-204ENST00000348259 BCKDHBP21953 392 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms