RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 COLGALT1Q8NBJ5 622 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
ECM1-201ENST00000346569 RBM41Q96IZ5 413 aaKnown RBP11.49□□□□□ -0.57
ECM1-201ENST00000346569 ZNF558Q96NG5 402 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 SLITRK1Q96PX8 696 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 PEBP4Q96S96 227 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 NPY6RQ99463 290 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 RHOXF2Q9BQY4 288 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 POPDC2Q9HBU9 364 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 MTRRQ9UBK8 725 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 PRKAG2Q9UGJ0 569 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 PCSK1NQ9UHG2 260 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 EFR3BQ9Y2G0 817 aa11.49□□□□□ -0.57
ECM1-201ENST00000346569 MRPL42Q9Y6G3 142 aaKnown RBP11.49□□□□□ -0.57
ECM1-201ENST00000346569 NLRC5Q86WI3 1866 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 MTMR11A4FU01 709 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 PI4K2BG5E9Z4 385 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 DAB1O75553 588 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 LTFP02788 710 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 TUBBP07437 444 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 H2AFXP16104 143 aaPredicted RBP11.48□□□□□ -0.57
ECM1-201ENST00000346569 LAG3P18627 525 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 GRIK1P39086 918 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 CDKN2BP42772 138 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 ATP11AP98196 1134 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 DSG1Q02413 1049 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 ADCY2Q08462 1091 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 SYPL2Q5VXT5 272 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 PRSS55Q6UWB4 352 aaPredicted RBP11.48□□□□□ -0.57
ECM1-201ENST00000346569 BEND5Q7L4P6 421 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 GPR65Q8IYL9 337 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 ATAD1Q8NBU5 361 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 FBXO22Q8NEZ5 403 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 FAM71BQ8TC56 605 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 SPPL2BQ8TCT7 592 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 FAM172AQ8WUF8 416 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 HDAC7Q8WUI4 952 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 TEKT4Q8WW24 435 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 MAIP1Q8WWC4 291 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 HERVK_113Q902F9 699 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 PNKPQ96T60 521 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 TBCBQ99426 244 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 KRT12Q99456 494 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 CLSTN3Q9BQT9 956 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 OSBPL8Q9BZF1 889 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 LRRC19Q9H756 370 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 ABI2Q9NYB9 513 aaPredicted RBP11.48□□□□□ -0.57
ECM1-201ENST00000346569 SPG21Q9NZD8 308 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 CXXC1Q9P0U4 656 aaPredicted RBP11.48□□□□□ -0.57
ECM1-201ENST00000346569 CALCOCO1Q9P1Z2 691 aa11.48□□□□□ -0.57
ECM1-201ENST00000346569 PTPRDP23468 1912 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 ALPK3Q96L96 1907 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 FAM92AA1XBS5 289 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 ADAM12O43184 909 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 LILRB3O75022 631 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 RALAP11233 206 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 CETN2P41208 172 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 PITX1P78337 314 aaPredicted RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 LLGL1Q15334 1064 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 CDO1Q16878 200 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 DCAF6Q58WW2 860 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 KCNT1Q5JUK3 1230 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 SPOUT1Q5T280 376 aaKnown RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 OTUD1Q5VV17 481 aaPredicted RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 SPOCD1Q6ZMY3 1216 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 RNF19BQ6ZMZ0 732 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 ADAT2Q7Z6V5 191 aaKnown RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 DDX53Q86TM3 631 aaKnown RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 C12orf50Q8NA57 414 aaPredicted RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 SCAMP5Q8TAC9 235 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 PHOSPHO2Q8TCD6 241 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 C2orf15Q8WU43 125 aaKnown RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 CLP1Q92989 425 aaKnown RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 FAM149B1Q96BN6 582 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 PGAP3Q96FM1 320 aaPredicted RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 HEMGNQ9BXL5 484 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 DDX47Q9H0S4 455 aaKnown RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 CRISPLD1Q9H336 500 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 SLITRK6Q9H5Y7 841 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 ZWILCHQ9H900 591 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 NGRNQ9NPE2 291 aaKnown RBP11.47□□□□□ -0.57
ECM1-201ENST00000346569 RRN3Q9NYV6 651 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 NAALADL1Q9UQQ1 740 aa11.47□□□□□ -0.57
ECM1-201ENST00000346569 hCG_1818297A0A087WSY0 165 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 WDR27A2RRH5 827 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 ZBBXA8MT70 800 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 TRIM66O15016 1216 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 MDM4O15151 490 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 RAD51CO43502 376 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 PRPSAP2O60256 369 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 ABLIM3O94929 683 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 KRT1P04264 644 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 HAPLN1P10915 354 aaPredicted RBP11.46□□□□□ -0.57
ECM1-201ENST00000346569 IL4RP24394 825 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 CHRNA3P32297 505 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 OR1D2P34982 312 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 GJC1P36383 396 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 PTGIRP43119 386 aa11.46□□□□□ -0.57
ECM1-201ENST00000346569 SLC5A3P53794 718 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms