RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GPD1P21695 349 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 HIRAP54198 1017 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 TMEM26Q6ZUK4 368 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 DEFB107AQ8IZN7 70 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 PIK3CDO00329 1044 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 MAGEB2O15479 319 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 GZMAP12544 262 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 ERFP50548 548 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 ARHGEF19Q8IW93 802 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 CYP39A1Q9NYL5 469 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 CYP2D6P10635 497 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 CCDC130P13994 396 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 GSTA3Q16772 222 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 FAM71DQ8N9W8 422 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 RPS7P62081 194 aaKnown RBP19.95■□□□□ 0.78
HDAC4-201ENST00000345617 EXTL3O43909 919 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 LSM8O95777 96 aaKnown RBP19.95■□□□□ 0.78
HDAC4-201ENST00000345617 RBP3P10745 1247 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 GARTP22102 1010 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 CDK7P50613 346 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 DGKKQ5KSL6 1271 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 PUS3Q9BZE2 481 aaKnown RBP19.95■□□□□ 0.78
HDAC4-201ENST00000345617 RMI1Q9H9A7 625 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 TMEM2Q9UHN6 1383 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 CCDC162PA2VCL2 907 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 FYNP06241 537 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 EIF1ADQ8N9N8 165 aaKnown RBP19.95■□□□□ 0.78
HDAC4-201ENST00000345617 EXD1Q8NHP7 514 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 CASKIN2Q8WXE0 1202 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 DYNLL2Q96FJ2 89 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 INTS13Q9NVM9 706 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L15C9J2P7 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L13C9JLJ4 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L11C9JVI0 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L18D6R9N7 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L22D6RA61 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L17D6RBQ6 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L19D6RCP7 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L20D6RJB6 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 RFC5P40937 340 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L24Q0WX57 530 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 DOK7Q18PE1 504 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 PAPD7Q5XG87 772 aaKnown RBP19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP17L6PQ6QN14 398 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 SLC26A11Q86WA9 606 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 FAM81AQ8TBF8 368 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 CCDC157Q569K6 752 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 TSHZ1Q6ZSZ6 1077 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 LENG1Q96BZ8 264 aaPredicted RBP19.95■□□□□ 0.78
HDAC4-201ENST00000345617 HAVCR1Q96D42 359 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 SPATA33Q96N06 139 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 MAP3K14Q99558 947 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 MUC3BQ9H195 1237 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 USP42Q9H9J4 1324 aaKnown RBP19.95■□□□□ 0.78
HDAC4-201ENST00000345617 CHN2P52757 468 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 PRKAA1Q13131 559 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 PALB2Q86YC2 1186 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 MYO5BQ9ULV0 1848 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 LOC100653049A0A140TA62 436 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 TRIM43BA6NCK2 446 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 ZC3H11AO75152 810 aaKnown RBP eCLIP19.95■□□□□ 0.78
HDAC4-201ENST00000345617 GSTT1P30711 240 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 MCL1Q07820 350 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 FEZF2Q8TBJ5 459 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 Q96MT0 163 aa19.95■□□□□ 0.78
HDAC4-201ENST00000345617 ZBTB22O15209 634 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 PTPN7P35236 360 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 PNPLA4P41247 253 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 RAB2AP61019 212 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 OSBPL6Q9BZF3 934 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 NOL6Q9H6R4 1146 aaKnown RBP19.94■□□□□ 0.78
HDAC4-201ENST00000345617 GAS2O43903 313 aaKnown RBP19.94■□□□□ 0.78
HDAC4-201ENST00000345617 ZNF682O95780 498 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 PUDPQ08623 228 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 EPS8L3Q8TE67 593 aaKnown RBP19.94■□□□□ 0.78
HDAC4-201ENST00000345617 ZNF518BQ9C0D4 1074 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 PAIP1Q9H074 479 aaKnown RBP19.94■□□□□ 0.78
HDAC4-201ENST00000345617 ZDHHC13Q8IUH4 622 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 CACTIN-AS1Q8N1I8 211 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 ZNF669Q96BR6 464 aaPredicted RBP19.94■□□□□ 0.78
HDAC4-201ENST00000345617 METP08581 1390 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 ATP12AP54707 1039 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 LGALS3BPQ08380 585 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 PLA2G4FQ68DD2 849 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 DHFR2Q86XF0 187 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 CAMK1DQ8IU85 385 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 ADHFE1Q8IWW8 467 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 PABPC5Q96DU9 382 aaKnown RBP19.94■□□□□ 0.78
HDAC4-201ENST00000345617 AGAP3Q96P47 875 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 AGPAT5Q9NUQ2 364 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 NR2C2P49116 596 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 ST8SIA6P61647 398 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 RTKN2Q8IZC4 609 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 TFE3P19532 575 aaPredicted RBP19.94■□□□□ 0.78
HDAC4-201ENST00000345617 MSH3P20585 1137 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 GRK3P35626 688 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 SNRNP48Q6IEG0 339 aaKnown RBP19.94■□□□□ 0.78
HDAC4-201ENST00000345617 PIK3C3Q8NEB9 887 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 SLC30A5Q8TAD4 765 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 LDLRP01130 860 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms