RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 STBD1O95210 358 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 KRT3P12035 628 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 STIP1P31948 543 aaKnown RBP18.49■□□□□ 0.55
VHL-202ENST00000345392 MMRN1Q13201 1228 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 TBC1D25Q3MII6 688 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 ATG16L1Q676U5 607 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 DARS2Q6PI48 645 aaKnown RBP18.49■□□□□ 0.55
VHL-202ENST00000345392 OR6Y1Q8NGX8 325 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 CENPKQ9BS16 269 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 SHCBP1LQ9BZQ2 653 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 A6NJR5 290 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 DGAT1O75907 488 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 HIRAP54198 1017 aaPredicted RBP18.49■□□□□ 0.55
VHL-202ENST00000345392 TEX44Q53QW1 395 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 MARK2Q7KZI7 788 aaKnown RBP18.49■□□□□ 0.55
VHL-202ENST00000345392 CRLF3Q8IUI8 442 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 ARHGAP18Q8N392 663 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 NIPA2Q8N8Q9 360 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 LRRN4Q8WUT4 740 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 FAF2Q96CS3 445 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 ATG4CQ96DT6 458 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 MMP19Q99542 508 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 PDLIM7Q9NR12 457 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 FBXO40Q9UH90 709 aa18.49■□□□□ 0.55
VHL-202ENST00000345392 WNT10BO00744 389 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 MCF2LO15068 1137 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 SNRPAP09012 282 aaKnown RBP18.48■□□□□ 0.55
VHL-202ENST00000345392 GRIA2P42262 883 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 EPHB1P54762 984 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 ASPHQ12797 758 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 TMCO4Q5TGY1 634 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 PPP1R2P3Q6NXS1 205 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 POLNQ7Z5Q5 900 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 CCDC60Q8IWA6 550 aaPredicted RBP18.48■□□□□ 0.55
VHL-202ENST00000345392 MCPH1Q8NEM0 835 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 SLC26A7Q8TE54 656 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 SLC16A10Q8TF71 515 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 S100A14Q9HCY8 104 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 CISHQ9NSE2 258 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 TTLL3Q9Y4R7 772 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 PPME1Q9Y570 386 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 LRRIQ4A6NIV6 560 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 RFPL1O75677 317 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 KRT37O76014 449 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 EDN1P05305 212 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 KRT7P08729 469 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 CPOXP36551 454 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 ENPEPQ07075 957 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 HIC1Q14526 733 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 PTPN20Q4JDL3 420 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 EFCAB3Q8N7B9 438 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 CCDC124Q96CT7 223 aaKnown RBP18.48■□□□□ 0.55
VHL-202ENST00000345392 CGRRF1Q99675 332 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 APOL6Q9BWW8 343 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 IMPG2Q9BZV3 1241 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 CYP26B1Q9NR63 512 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 SMYD2Q9NRG4 433 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 ADAMTS6Q9UKP5 1117 aa18.48■□□□□ 0.55
VHL-202ENST00000345392 HBS1LQ9Y450 684 aaKnown RBP18.48■□□□□ 0.55
VHL-202ENST00000345392 PDE5AO76074 875 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 STK10O94804 968 aaKnown RBP18.47■□□□□ 0.55
VHL-202ENST00000345392 MAP3K6O95382 1288 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 C1QAP02745 245 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 AQP4P55087 323 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 MYL6P60660 151 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 HADHQ16836 314 aaKnown RBP18.47■□□□□ 0.55
VHL-202ENST00000345392 LRRC23Q53EV4 343 aaPredicted RBP18.47■□□□□ 0.55
VHL-202ENST00000345392 MROH9Q5TGP6 573 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 DENND1BQ6P3S1 775 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 ISLR2Q6UXK2 745 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 PDSS2Q86YH6 399 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 ST13P4Q8IZP2 240 aaPredicted RBP18.47■□□□□ 0.55
VHL-202ENST00000345392 FAM172AQ8WUF8 416 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 VCX3BQ9H321 246 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 RPAP3Q9H6T3 665 aaPredicted RBP18.47■□□□□ 0.55
VHL-202ENST00000345392 VCX3AQ9NNX9 186 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 RAB6BQ9NRW1 208 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 SIRPGQ9P1W8 387 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 CNTNAP2Q9UHC6 1331 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 CYTH4Q9UIA0 394 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 SOX13Q9UN79 622 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 APOC4-APOC2K7ER74 178 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 APOC2P02655 101 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 TSHRP16473 764 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 PRKCEQ02156 737 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 DHDDSQ86SQ9 333 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 NCSTNQ92542 709 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 GPAMQ9HCL2 828 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 EFR3BQ9Y2G0 817 aa18.47■□□□□ 0.55
VHL-202ENST00000345392 K7ERI5 159 aa18.46■□□□□ 0.55
VHL-202ENST00000345392 IRF6O14896 467 aa18.46■□□□□ 0.55
VHL-202ENST00000345392 WDR46O15213 610 aaKnown RBP18.46■□□□□ 0.55
VHL-202ENST00000345392 LYPLA1O75608 230 aaPredicted RBP18.46■□□□□ 0.55
VHL-202ENST00000345392 OR6B1O95007 311 aa18.46■□□□□ 0.55
VHL-202ENST00000345392 LSM8O95777 96 aaKnown RBP18.46■□□□□ 0.55
VHL-202ENST00000345392 SERPINA6P08185 405 aa18.46■□□□□ 0.55
VHL-202ENST00000345392 CCNFP41002 786 aa18.46■□□□□ 0.55
VHL-202ENST00000345392 TNFSF9P41273 254 aa18.46■□□□□ 0.55
VHL-202ENST00000345392 DLG1Q12959 904 aa18.46■□□□□ 0.55
VHL-202ENST00000345392 MSLNQ13421 630 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms