RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CBWD2Q8IUF1 395 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 OMA1Q96E52 524 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 AGBL1Q96MI9 1066 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 DDX50Q9BQ39 737 aaKnown RBP18.64■□□□□ 0.57
SMC4-201ENST00000344722 NUDT12Q9BQG2 462 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 CROTQ9UKG9 612 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 ZNF263O14978 683 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 ADCY6O43306 1168 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 RAD23AP54725 363 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 FAAP100Q0VG06 881 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 ITGADQ13349 1161 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 ZNF618Q5T7W0 954 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 RRM2BQ7LG56 351 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 NANOGNBQ7Z5D8 188 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 FBXO33Q7Z6M2 555 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 FAM13CQ8NE31 585 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 BAP1Q92560 729 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 OTUB1Q96FW1 271 aaPredicted RBP18.64■□□□□ 0.57
SMC4-201ENST00000344722 BDH2Q9BUT1 245 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 DNM1LO00429 736 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 SF3B3Q15393 1217 aaKnown RBP18.64■□□□□ 0.57
SMC4-201ENST00000344722 AGKQ53H12 422 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 TMEM63BQ5T3F8 832 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 USP33Q8TEY7 942 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 NEUROG2Q9H2A3 272 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 TDRD3Q9H7E2 651 aaKnown RBP18.64■□□□□ 0.57
SMC4-201ENST00000344722 TIMMDC1Q9NPL8 285 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 AVENQ9NQS1 362 aaPredicted RBP18.64■□□□□ 0.57
SMC4-201ENST00000344722 CHST7Q9NS84 486 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 EVPLLA8MZ36 301 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 SP100P23497 879 aaPredicted RBP18.64■□□□□ 0.57
SMC4-201ENST00000344722 GPSM2P81274 684 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 MGAT5Q09328 741 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 PLA2G4FQ68DD2 849 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 HES6Q96HZ4 224 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 DAGLAQ9Y4D2 1042 aa18.64■□□□□ 0.57
SMC4-201ENST00000344722 KBTBD13C9JR72 458 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 SUPT7LO94864 414 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 RNF220Q5VTB9 566 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 SZRD1Q7Z422 152 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 STRA8Q7Z7C7 330 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 FNIP1Q8TF40 1166 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 RNPEPQ9H4A4 650 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 CD274Q9NZQ7 290 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 ZMYM2Q9UBW7 1377 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 MAGEB2O15479 319 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 CDK7P50613 346 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 GSCP56915 257 aaPredicted RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 SVOPQ8N4V2 548 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 UBE2OQ9C0C9 1292 aaKnown RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 DIABLOQ9NR28 239 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 MTTPP55157 894 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 SNX32Q86XE0 403 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 DHRSXQ8N5I4 330 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 CBWD1Q9BRT8 395 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 THUMPD3Q9BV44 507 aaKnown RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 HOXC10Q9NYD6 342 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 C6orf203Q9P0P8 240 aaPredicted RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 CDV3Q9UKY7 258 aaKnown RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 ADGRA2Q96PE1 1338 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 NR5A2O00482 541 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 TRDMT1O14717 391 aaKnown RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 MED26O95402 600 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 MRPS22P82650 360 aaKnown RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 CCDC142Q17RM4 750 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 LRRC39Q96DD0 335 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 VCPIP1Q96JH7 1222 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 KCTD14Q9BQ13 255 aaPredicted RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 FAM49AQ9H0Q0 323 aaPredicted RBP18.63■□□□□ 0.57
SMC4-201ENST00000344722 LRRC19Q9H756 370 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 TMEM161AQ9NX61 479 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 SH3GLB1Q9Y371 365 aa18.63■□□□□ 0.57
SMC4-201ENST00000344722 DYTNA2CJ06 578 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 LCA5LO95447 670 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 DDX5P17844 614 aaKnown RBP18.62■□□□□ 0.57
SMC4-201ENST00000344722 ATP6V1B2P21281 511 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 BBS7Q8IWZ6 715 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 CENPLQ8N0S6 344 aaPredicted RBP18.62■□□□□ 0.57
SMC4-201ENST00000344722 OR8H2Q8N162 312 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 SPATA20Q8TB22 786 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 ZNF333Q96JL9 665 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 OSBPL7Q9BZF2 842 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 PRR12Q9ULL5 1215 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
SMC4-201ENST00000344722 FAM237BA0A1B0GVD1 139 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 DCXO43602 365 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 NDUFS3O75489 264 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 UQCRBP14927 111 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 ETS2P15036 469 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 AVPR1AP37288 418 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 SNX17Q15036 470 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 DGKDQ16760 1214 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 MTERF3Q96E29 417 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 CEP44Q9C0F1 390 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 RMI1Q9H9A7 625 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 UMODL1Q5DID0 1318 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 POLRMTO00411 1230 aaKnown RBP18.62■□□□□ 0.57
SMC4-201ENST00000344722 TRIM13O60858 407 aa18.62■□□□□ 0.57
SMC4-201ENST00000344722 EDF1O60869 148 aaKnown RBP18.62■□□□□ 0.57
SMC4-201ENST00000344722 TMEM132DQ14C87 1099 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms