RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 DRG2P55039 364 aaKnown RBP14.19□□□□□ -0.14
CDC42-202ENST00000344548 COPS2P61201 443 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 DPYSL3Q14195 570 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 PPP1R7Q15435 360 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 ODF2Q5BJF6 829 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.19□□□□□ -0.142e-8■■■■□ 25.6
CDC42-202ENST00000344548 CCDC185Q8N715 623 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 ATL2Q8NHH9 583 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 ACTL9Q8TC94 416 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 PWWP2AQ96N64 755 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 GPR62Q9BZJ7 368 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 VIPAS39Q9H9C1 493 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 CYLDQ9NQC7 956 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 FAM114A2Q9NRY5 505 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 NLRC5Q86WI3 1866 aa14.19□□□□□ -0.14
CDC42-202ENST00000344548 PRPSAP2O60256 369 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 PCSK1P29120 753 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 PTPN9P43378 593 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 PGFP49763 221 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 OTUD4Q01804 1114 aaKnown RBP14.18□□□□□ -0.14
CDC42-202ENST00000344548 OASLQ15646 514 aaKnown RBP14.18□□□□□ -0.14
CDC42-202ENST00000344548 DCAF6Q58WW2 860 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 RAB41Q5JT25 222 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 TMCO2Q7Z6W1 182 aaPredicted RBP14.18□□□□□ -0.14
CDC42-202ENST00000344548 IQCKQ8N0W5 287 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 PYROXD2Q8N2H3 581 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 EIF1ADQ8N9N8 165 aaKnown RBP14.18□□□□□ -0.14
CDC42-202ENST00000344548 ADAM32Q8TC27 787 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 LRRN4Q8WUT4 740 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 MAIP1Q8WWC4 291 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 ZIM3Q96PE6 472 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 TMEM121Q9BTD3 319 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 CSNK1G1Q9HCP0 422 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 PCDHB7Q9Y5E2 793 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 POLR3GO15318 223 aaPredicted RBP14.18□□□□□ -0.14
CDC42-202ENST00000344548 MAP3K6O95382 1288 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 ITGB8P26012 769 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 HSPA9P38646 679 aaKnown RBP14.18□□□□□ -0.14
CDC42-202ENST00000344548 MATKP42679 507 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 GDF10P55107 478 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 DAOAP59103 153 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 YWHAZP63104 245 aaKnown RBP14.18□□□□□ -0.14
CDC42-202ENST00000344548 YWHAHQ04917 246 aaPredicted RBP14.18□□□□□ -0.14
CDC42-202ENST00000344548 TMC3Q7Z5M5 1100 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 METTL23Q86XA0 190 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 FAM131BQ86XD5 332 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 OR2W6PQ8NHA6 318 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 SCAMP5Q8TAC9 235 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 SEPT8Q92599 483 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 ZNF333Q96JL9 665 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 ANLNQ9NQW6 1124 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 MARCH5Q9NX47 278 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 MTMR10Q9NXD2 777 aa14.18□□□□□ -0.14
CDC42-202ENST00000344548 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.18□□□□□ -0.144e-9■■□□□ 13.2
CDC42-202ENST00000344548 SYNJ2BP-COX16A0A087WUM0 186 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 I6L893 689 aaPredicted RBP14.17□□□□□ -0.14
CDC42-202ENST00000344548 COL6A1P12109 1028 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 CYP2F1P24903 491 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 KLRC2P26717 231 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 HSD17B3P37058 310 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 SLC11A1P49279 550 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 NNTQ13423 1086 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 BYSLQ13895 437 aaKnown RBP14.17□□□□□ -0.14
CDC42-202ENST00000344548 EFHC1Q5JVL4 640 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 BBS12Q6ZW61 710 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 RFX6Q8HWS3 928 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 SIX6OS1Q8N1H7 587 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 SLC35B2Q8TB61 432 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 URGCPQ8TCY9 931 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 BCL7CQ8WUZ0 217 aaPredicted RBP14.17□□□□□ -0.14
CDC42-202ENST00000344548 FMO2Q99518 471 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 TXLNGYQ9BZA5 131 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 PCDH18Q9HCL0 1135 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 COX16Q9P0S2 106 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 RASAL2Q9UJF2 1139 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 PTPRDP23468 1912 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 HSF2BPO75031 334 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 CXCL10P02778 98 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 SCNN1AP37088 669 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 SLC8A3P57103 927 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 SNX16P57768 344 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 DHX9Q08211 1270 aaKnown RBP14.17□□□□□ -0.14
CDC42-202ENST00000344548 PTK6Q13882 451 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 ARCQ7LC44 396 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 BNIPLQ7Z465 357 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 MREGQ8N565 214 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 PQLC3Q8N755 202 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 PCDH19Q8TAB3 1148 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 ART4Q93070 314 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 NT5C3BQ969T7 300 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 SMARCD1Q96GM5 515 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 EPB41L4BQ9H329 900 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 ELAC1Q9H777 363 aaKnown RBP14.17□□□□□ -0.14
CDC42-202ENST00000344548 AAASQ9NRG9 546 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 ASIC3Q9UHC3 531 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 ZNF148Q9UQR1 794 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 ATP11BQ9Y2G3 1177 aa14.17□□□□□ -0.14
CDC42-202ENST00000344548 GOLGA6BA6NDN3 693 aa14.16□□□□□ -0.14
CDC42-202ENST00000344548 TMEM189-UBE2V1I3L0A0 370 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms