RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TPD52L1Q16890 204 aaPredicted RBP16.94■□□□□ 0.3
ATG4B-201ENST00000344376 GOLGA7BQ2TAP0 167 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 FBXO43Q4G163 708 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 FSTL4Q6MZW2 842 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 TSSK4Q6SA08 328 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 CCDC186Q7Z3E2 898 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 CREBRFQ8IUR6 639 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 OTUB2Q96DC9 234 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 CDK5RAP1Q96SZ6 601 aaKnown RBP16.94■□□□□ 0.3
ATG4B-201ENST00000344376 UBXN6Q9BZV1 441 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 CYLDQ9NQC7 956 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 DACH1Q9UI36 760 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 PCDHB4Q9Y5E5 795 aa16.94■□□□□ 0.3
ATG4B-201ENST00000344376 HELZP42694 1942 aaKnown RBP16.93■□□□□ 0.3
ATG4B-201ENST00000344376 ATG13O75143 517 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 ADH1CP00326 375 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 PAEPP09466 180 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 RALAP11233 206 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 VDRP11473 427 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 ATP5C1P36542 298 aaKnown RBP16.93■□□□□ 0.3
ATG4B-201ENST00000344376 GALK1P51570 392 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 SATB1Q01826 763 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 GAS6Q14393 721 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 TMEM270Q6UE05 265 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 ARHGAP18Q8N392 663 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 UBR7Q8N806 425 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 EHBP1Q8NDI1 1231 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 CCDC26Q8TAB7 109 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 CHFRQ96EP1 664 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 ZFRQ96KR1 1074 aaKnown RBP16.93■□□□□ 0.3
ATG4B-201ENST00000344376 CNOT6LQ96LI5 555 aaKnown RBP16.93■□□□□ 0.3
ATG4B-201ENST00000344376 NAGPAQ9UK23 515 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 TSPAN16Q9UKR8 245 aa16.93■□□□□ 0.3
ATG4B-201ENST00000344376 A0A1W2PQH9 124 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 SCAMP3O14828 347 aaKnown RBP16.92■□□□□ 0.3
ATG4B-201ENST00000344376 PAPSS2O95340 614 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-201ENST00000344376 EGFP01133 1207 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 CYP17A1P05093 508 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 IRF1P10914 325 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 RARGP13631 454 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 GCNT1Q02742 428 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 BST2Q10589 180 aaKnown RBP16.92■□□□□ 0.3
ATG4B-201ENST00000344376 PIGZQ86VD9 579 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 NELL1Q92832 810 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 INTS2Q9H0H0 1204 aaKnown RBP16.92■□□□□ 0.3
ATG4B-201ENST00000344376 LSM7Q9UK45 103 aaKnown RBP16.92■□□□□ 0.3
ATG4B-201ENST00000344376 USP3Q9Y6I4 520 aa16.92■□□□□ 0.3
ATG4B-201ENST00000344376 ZFHX2Q9C0A1 2572 aaPredicted RBP16.92■□□□□ 0.3
ATG4B-201ENST00000344376 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 XPO1O14980 1071 aaKnown RBP16.91■□□□□ 0.3
ATG4B-201ENST00000344376 SETSIPP0DME0 302 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 DHCR24Q15392 516 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 C10orf120Q5SQS8 335 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 KLHDC10Q6PID8 442 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 TTC30AQ86WT1 665 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 ADGRG2Q8IZP9 1017 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 ZBTB44Q8NCP5 570 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 LMO3Q8TAP4 145 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.91■□□□□ 0.3
ATG4B-201ENST00000344376 CLIC5Q9NZA1 410 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 DNMT3LQ9UJW3 386 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 CACNA1IQ9P0X4 2223 aa16.91■□□□□ 0.3
ATG4B-201ENST00000344376 RNF40O75150 1001 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 TDGF1P13385 188 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 PGFP49763 221 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 STILQ15468 1287 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 RAB41Q5JT25 222 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 RRAGAQ7L523 313 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 FAM114A1Q8IWE2 563 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 NMUR1Q9HB89 426 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 LRRC4Q9HBW1 653 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 LMBRD1Q9NUN5 540 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 OSER1Q9NX31 292 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 MYH10P35580 1976 aa16.9■□□□□ 0.3
ATG4B-201ENST00000344376 O00370 1275 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 TBX18O95935 607 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 ADH5P11766 374 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 MTIF2P46199 727 aaKnown RBP16.89■□□□□ 0.3
ATG4B-201ENST00000344376 PLA2G4AP47712 749 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 TKTL1P51854 596 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 PDE4CQ08493 712 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 BTBD8Q5XKL5 378 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 NAIF1Q69YI7 327 aaPredicted RBP16.89■□□□□ 0.3
ATG4B-201ENST00000344376 RSRC2Q7L4I2 434 aaKnown RBP16.89■□□□□ 0.3
ATG4B-201ENST00000344376 ARHGEF19Q8IW93 802 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 SIX6OS1Q8N1H7 587 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 ZNF276Q8N554 614 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 RBBP8NLQ8NC74 664 aaPredicted RBP16.89■□□□□ 0.3
ATG4B-201ENST00000344376 KAT5Q92993 513 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 ACDQ96AP0 544 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 FAM81BQ96LP2 452 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 KLF16Q9BXK1 252 aaPredicted RBP16.89■□□□□ 0.3
ATG4B-201ENST00000344376 FBRSL1Q9HCM7 1045 aaKnown RBP16.89■□□□□ 0.3
ATG4B-201ENST00000344376 SLC8A2Q9UPR5 921 aa16.89■□□□□ 0.3
ATG4B-201ENST00000344376 MYO16Q9Y6X6 1858 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.89■□□□□ 0.29
ATG4B-201ENST00000344376 CHURC1-FNTBB4DL54 471 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 LILRB5O75023 590 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 ZBED1O96006 694 aa16.89■□□□□ 0.29
ATG4B-201ENST00000344376 OPRD1P41143 372 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms