RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 RILPQ96NA2 401 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PAFAH2Q99487 392 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 GPR88Q9GZN0 384 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ACSS3Q9H6R3 686 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PNPLA3Q9NST1 481 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 TAS2R14Q9NYV8 317 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PTBP2Q9UKA9 531 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 PRPF19Q9UMS4 504 aaKnown RBP8.44□□□□□ -1.06
ATG4A-201ENST00000343524 MYRFQ9Y2G1 1151 aa8.44□□□□□ -1.06
ATG4A-201ENST00000343524 ASTN1O14525 1302 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 FAM237BA0A1B0GVD1 139 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 A0A1W2PPM1 405 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 USP17L21D6R901 530 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 K7EPI3 171 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 EIF3FO00303 357 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-201ENST00000343524 AREL1O15033 823 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 SPAG6O75602 509 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 FAM155BO75949 473 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 THRAP10827 490 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 CCDC130P13994 396 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 JAK1P23458 1154 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 CIITAP33076 1130 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 ETV4P43268 484 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 ADCY7P51828 1080 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 DPYSQ14117 519 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 MOGQ16653 247 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 CCDC142Q17RM4 750 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 METTL21CQ5VZV1 264 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 CIAPIN1Q6FI81 312 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 DRICH1Q6PGQ1 229 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-201ENST00000343524 DCLRE1AQ6PJP8 1040 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 PRUNE1Q86TP1 453 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 GPR180Q86V85 440 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 ZNF354CQ86Y25 554 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 WDR75Q8IWA0 830 aaKnown RBP8.43□□□□□ -1.06
ATG4A-201ENST00000343524 PDPRQ8NCN5 879 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 TNIP2Q8NFZ5 429 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 TRUB1Q8WWH5 349 aaKnown RBP8.43□□□□□ -1.06
ATG4A-201ENST00000343524 TTC17Q96AE7 1141 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 FERMT1Q9BQL6 677 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 TDRD1Q9BXT4 1180 aaKnown RBP8.43□□□□□ -1.06
ATG4A-201ENST00000343524 RTFDC1Q9BY42 306 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-201ENST00000343524 SLC2A11Q9BYW1 496 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 PAIP1Q9H074 479 aaKnown RBP8.43□□□□□ -1.06
ATG4A-201ENST00000343524 ZHX3Q9H4I2 956 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 SMYD3Q9H7B4 428 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 MOV10Q9HCE1 1003 aaKnown RBP8.43□□□□□ -1.06
ATG4A-201ENST00000343524 OLFML3Q9NRN5 406 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 SLC38A7Q9NVC3 462 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 MKS1Q9NXB0 559 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 POMPQ9Y244 141 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 FRMD4BQ9Y2L6 1034 aa8.43□□□□□ -1.06
ATG4A-201ENST00000343524 A0A087WXM4 84 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 CFAP99D6REC4 459 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 TBCAO75347 108 aaKnown RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 H6PDO95479 791 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 BGNP21810 368 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 CA8P35219 290 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 RXRGP48443 463 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 TXNL4AP83876 142 aaKnown RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 SLC18A2Q05940 514 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 KCTD21Q4G0X4 260 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 KRT39Q6A163 491 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 SPOPLQ6IQ16 392 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 ELMSAN1Q6PJG2 1045 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 ARCQ7LC44 396 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 HAUS6Q7Z4H7 955 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 FBXW8Q8N3Y1 598 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 PCYOX1LQ8NBM8 494 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 ZNF280CQ8ND82 737 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 GSDMBQ8TAX9 411 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 MZB1Q8WU39 189 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 ATG4AQ8WYN0 398 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 RMND5BQ96G75 393 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 CTRCQ99895 268 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 OSBPL11Q9BXB4 747 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 FGFBP2Q9BYJ0 223 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 GCOM2Q9BZD3 368 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 CLK4Q9HAZ1 481 aaKnown RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 VTA1Q9NP79 307 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 TMEM9Q9P0T7 183 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 CNTN3Q9P232 1028 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 FAM198AQ9UFP1 575 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 KLHL3Q9UH77 587 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 SLC8A2Q9UPR5 921 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 GNEQ9Y223 722 aaKnown RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 PCDHB2Q9Y5E7 798 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 SLC30A1Q9Y6M5 507 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 ITGB4P16144 1822 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 ZNF536O15090 1300 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 PRR5-ARHGAP8B1AHC4 643 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 CYP26A1O43174 497 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 XPOTO43592 962 aaKnown RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 SLC37A4O43826 429 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 NMT2O60551 498 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 SULT1C4O75897 302 aa8.42□□□□□ -1.06
ATG4A-201ENST00000343524 ZBTB11O95625 1053 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-201ENST00000343524 FUCA1P04066 466 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms