RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 WDR59Q6PJI9 974 aa23.08■■□□□ 1.29
RBM38-201ENST00000342690 MAB21L3Q8N8X9 362 aa23.08■■□□□ 1.29
RBM38-201ENST00000342690 ZSCAN18Q8TBC5 510 aaPredicted RBP23.08■■□□□ 1.29
RBM38-201ENST00000342690 IPO4Q8TEX9 1081 aaKnown RBP23.08■■□□□ 1.29
RBM38-201ENST00000342690 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.08■■□□□ 1.29
RBM38-201ENST00000342690 DEF6Q9H4E7 631 aa23.08■■□□□ 1.29
RBM38-201ENST00000342690 SYNCQ9H7C4 482 aa23.08■■□□□ 1.29
RBM38-201ENST00000342690 TRPC7Q9HCX4 862 aa23.08■■□□□ 1.29
RBM38-201ENST00000342690 ARHGAP20Q9P2F6 1191 aa23.08■■□□□ 1.29
RBM38-201ENST00000342690 CHORDC1Q9UHD1 332 aaPredicted RBP23.08■■□□□ 1.29
RBM38-201ENST00000342690 CYTH4Q9UIA0 394 aa23.08■■□□□ 1.29
RBM38-201ENST00000342690 C2orf78A6NCI8 922 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 ANHXE9PGG2 379 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 CYP1A1P04798 512 aaPredicted RBP23.07■■□□□ 1.28
RBM38-201ENST00000342690 USP17L7P0C7H9 530 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 LCP1P13796 627 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 FCARP24071 287 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 PPP1R2P3Q6NXS1 205 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 PARM1Q6UWI2 310 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 CCDC186Q7Z3E2 898 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 MON1AQ86VX9 555 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 WDTC1Q8N5D0 677 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 FGF14Q92915 247 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 PPP1R13BQ96KQ4 1090 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 PCDHB18PQ96TA0 734 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 ULBP1Q9BZM6 244 aa23.07■■□□□ 1.28
RBM38-201ENST00000342690 SSU72P8A0A1W2PR75 194 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 PIK3R2O00459 728 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 ABL1P00519 1130 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 ASGR2P07307 311 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 PLEKP08567 350 aaPredicted RBP23.06■■□□□ 1.28
RBM38-201ENST00000342690 EIF4A3P38919 411 aaKnown RBP23.06■■□□□ 1.28
RBM38-201ENST00000342690 NSFP46459 744 aaKnown RBP23.06■■□□□ 1.28
RBM38-201ENST00000342690 CDK17Q00537 523 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 SNX30Q5VWJ9 437 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 MTSS1LQ765P7 747 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 ERICH1Q86X53 443 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 RNF135Q8IUD6 432 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 RSAD2Q8WXG1 361 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 CPA5Q8WXQ8 436 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 SMARCD2Q92925 531 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 SLC22A12Q96S37 553 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 SLC4A5Q9BY07 1137 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 MIS12Q9H081 205 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 NMUR1Q9HB89 426 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 ZMYM5Q9UJ78 669 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 NUMBLQ9Y6R0 609 aa23.06■■□□□ 1.28
RBM38-201ENST00000342690 A0A1W2PQH9 124 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 SOBPA7XYQ1 873 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 FBXO21O94952 628 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 ZBED1O96006 694 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 RPL34P49207 117 aaKnown RBP23.05■■□□□ 1.28
RBM38-201ENST00000342690 MAPK8IP2Q13387 824 aaPredicted RBP23.05■■□□□ 1.28
RBM38-201ENST00000342690 PM20D1Q6GTS8 502 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 BHLHA9Q7RTU4 235 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 SCD5Q86SK9 330 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 ARID3BQ8IVW6 561 aaPredicted RBP23.05■■□□□ 1.28
RBM38-201ENST00000342690 CMTM8Q8IZV2 173 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 NDRG1Q92597 394 aaKnown RBP23.05■■□□□ 1.28
RBM38-201ENST00000342690 CPXM1Q96SM3 734 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 KXD1Q9BQD3 176 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 SMG9Q9H0W8 520 aaKnown RBP23.05■■□□□ 1.28
RBM38-201ENST00000342690 KCNK12Q9HB15 430 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 TRPV4Q9HBA0 871 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 CNGB3Q9NQW8 809 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 TLR8Q9NR97 1041 aaKnown RBP23.05■■□□□ 1.28
RBM38-201ENST00000342690 OSER1Q9NX31 292 aa23.05■■□□□ 1.28
RBM38-201ENST00000342690 TRAV19A0A0A6YYK7 116 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 E5RJQ4 531 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 DDX3XO00571 662 aaKnown RBP eCLIP23.04■■□□□ 1.286e-14■■■□□ 15.2
RBM38-201ENST00000342690 PRAMEF12O95522 483 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 OAS1P00973 400 aaKnown RBP23.04■■□□□ 1.28
RBM38-201ENST00000342690 UNGP13051 313 aaPredicted RBP23.04■■□□□ 1.28
RBM38-201ENST00000342690 WEE1P30291 646 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 CENPCQ03188 943 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 TANGO2Q6ICL3 276 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 TMEM110Q86TL2 294 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 SCML4Q8N228 414 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 ARL14EPQ8N8R7 260 aaPredicted RBP23.04■■□□□ 1.28
RBM38-201ENST00000342690 RSPRY1Q96DX4 576 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 CCDC42Q96M95 316 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 CYP2S1Q96SQ9 504 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 RPP25Q9BUL9 199 aaKnown RBP23.04■■□□□ 1.28
RBM38-201ENST00000342690 NHEJ1Q9H9Q4 299 aaPredicted RBP23.04■■□□□ 1.28
RBM38-201ENST00000342690 IGSF9Q9P2J2 1179 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 ADAMTS1Q9UHI8 967 aa23.04■■□□□ 1.28
RBM38-201ENST00000342690 SART1O43290 800 aaKnown RBP23.03■■□□□ 1.28
RBM38-201ENST00000342690 AKR1B10O60218 316 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 OLFM2O95897 454 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 PFKLP17858 780 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 AVPR1AP37288 418 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 VIPR2P41587 438 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 DAOAP59103 153 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 PTPN20Q4JDL3 420 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 ACAD10Q6JQN1 1059 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 ARHGAP18Q8N392 663 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 SLC30A5Q8TAD4 765 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 OLIG1Q8TAK6 271 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 CLEC4CQ8WTT0 213 aa23.03■■□□□ 1.28
RBM38-201ENST00000342690 NXPE3Q969Y0 559 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms