RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 MAK16Q9BXY0 300 aaKnown RBP20.89■□□□□ 0.93
RTN1-202ENST00000342503 GOLGA6CA6NDK9 693 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 ITGB1P05556 798 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 ZSCAN5DPP0CG00 497 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 GOLGA6DP0CG33 693 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 ETS1P14921 441 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 SELPP16109 830 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 PAX3P23760 479 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 YY1P25490 414 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 ATXN1P54253 815 aaKnown RBP20.88■□□□□ 0.93
RTN1-202ENST00000342503 CAV1Q03135 178 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 SLMAPQ14BN4 828 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 CA9Q16790 459 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 IZUMO3Q5VZ72 239 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 GLB1LQ6UWU2 654 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 DEFB106AQ8N104 65 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 SIX6OS1Q8N1H7 587 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 BBOF1Q8ND07 529 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 TMEM121Q9BTD3 319 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 GOLGA6AQ9NYA3 693 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 DSEQ9UL01 958 aa20.88■□□□□ 0.93
RTN1-202ENST00000342503 F8W810 466 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 APOC4-APOC2K7ER74 178 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 DAB1O75553 588 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 APOC2P02655 101 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 PECAM1P16284 738 aaPredicted RBP20.87■□□□□ 0.93
RTN1-202ENST00000342503 CHKAP35790 457 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 MATKP42679 507 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 TKTL1P51854 596 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 CACNA2D1P54289 1103 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 ZNF844Q08AG5 666 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 MAP7D3Q8IWC1 876 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 FAM126BQ8IXS8 530 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 ZMIZ2Q8NF64 920 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 CCHCR1Q8TD31 782 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 MYLPFQ96A32 169 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 ACBD6Q9BR61 282 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 PABPC3Q9H361 631 aaKnown RBP20.87■□□□□ 0.93
RTN1-202ENST00000342503 PCDH18Q9HCL0 1135 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 AAASQ9NRG9 546 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 DNM1LO00429 736 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 MDM4O15151 490 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 B4GALT3O60512 393 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 DDHD2O94830 711 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 MYCP01106 439 aaPredicted RBP20.87■□□□□ 0.93
RTN1-202ENST00000342503 RARGP13631 454 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 P3H1Q32P28 736 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 INTS6LQ5JSJ4 861 aaKnown RBP20.87■□□□□ 0.93
RTN1-202ENST00000342503 CCDC25Q86WR0 208 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 ZNF280BQ86YH2 543 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 FAM149B1Q96BN6 582 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 SUSD3Q96L08 255 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 RNF157Q96PX1 679 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 KCNK16Q96T55 309 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 FTHL17Q9BXU8 183 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 SEMA4AQ9H3S1 761 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 C10orf88Q9H8K7 445 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 TMBIM4Q9HC24 238 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 TMEM30AQ9NV96 361 aa20.87■□□□□ 0.93
RTN1-202ENST00000342503 SGK1O00141 431 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 IL4RP24394 825 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 SULT1E1P49888 294 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 YWHAZP63104 245 aaKnown RBP20.86■□□□□ 0.93
RTN1-202ENST00000342503 TFDP2Q14188 446 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 NOMO2Q5JPE7 1267 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 ERMARDQ5T6L9 678 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 FAM171BQ6P995 826 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 NPNTQ6UXI9 565 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 STRADAQ7RTN6 431 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 URGCPQ8TCY9 931 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 EXOC4Q96A65 974 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 SMARCD1Q96GM5 515 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 SEZ6LQ9BYH1 1024 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 ULBP1Q9BZM6 244 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 CALCOCO1Q9P1Z2 691 aa20.86■□□□□ 0.93
RTN1-202ENST00000342503 NLRC5Q86WI3 1866 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 DNALI1O14645 258 aaPredicted RBP20.85■□□□□ 0.93
RTN1-202ENST00000342503 NBNO60934 754 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 EIF3EP60228 445 aaKnown RBP20.85■□□□□ 0.93
RTN1-202ENST00000342503 BFSP2Q13515 415 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 SLC25A52Q3SY17 297 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 ANKRD20A8PQ5CZ79 823 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 UBAP2Q5T6F2 1119 aaKnown RBP20.85■□□□□ 0.93
RTN1-202ENST00000342503 DENND2CQ68D51 928 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 KCTD16Q68DU8 428 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 OVOS1Q6IE37 1185 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 HIBCHQ6NVY1 386 aaPredicted RBP20.85■□□□□ 0.93
RTN1-202ENST00000342503 GPRIN1Q7Z2K8 1008 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 FAM76AQ8TAV0 307 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 TMEM209Q96SK2 561 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 PKMYT1Q99640 499 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 RHOBTB2Q9BYZ6 727 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 PTPRDP23468 1912 aa20.85■□□□□ 0.93
RTN1-202ENST00000342503 GOLGA6L10A6NI86 522 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 HHLA1C9JL84 531 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 NRP1O14786 923 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 FBXO21O94952 628 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 DSC1Q08554 894 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 GPS1Q13098 491 aa20.84■□□□□ 0.93
RTN1-202ENST00000342503 GPNMBQ14956 572 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms