RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 CCNE2O96020 404 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 HMOX2P30519 316 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 EFTUD2Q15029 972 aaKnown RBP eCLIP20.29■□□□□ 0.847e-6■■■■■ 30.5
SEMA6C-201ENST00000341697 CCDC33Q8N5R6 958 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 MTMR8Q96EF0 704 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 RPS6KL1Q9Y6S9 549 aa20.29■□□□□ 0.84
SEMA6C-201ENST00000341697 BDNFP23560 247 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 SLC29A2Q14542 456 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 MRPL40Q9NQ50 206 aaKnown RBP20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 RNF19AQ9NV58 838 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 GUCY1A3Q02108 690 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 TERF2Q15554 542 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 UXTQ9UBK9 157 aaPredicted RBP20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 TRIM66O15016 1216 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 JCHAINP01591 159 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 PTPN1P18031 435 aaKnown RBP20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 GEMIN4P57678 1058 aaKnown RBP20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 WSCD1Q658N2 575 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 AMIGO3Q86WK7 504 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 DEFB106AQ8N104 65 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 TBC1D19Q8N5T2 526 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 WHRNQ9P202 907 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 CHRM3P20309 590 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 STX3Q13277 289 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 C12orf42Q96LP6 360 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 TMEM121Q9BTD3 319 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 RNPEPQ9H4A4 650 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 SCUBE2Q9NQ36 999 aa20.28■□□□□ 0.84
SEMA6C-201ENST00000341697 SMIM35A0A1B0GVV1 85 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 SDR42E2A6NKP2 422 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 CD52P31358 61 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 RNF217Q8TC41 542 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 ACTL9Q8TC94 416 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 CASKIN2Q8WXE0 1202 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 PRMT1Q99873 361 aaKnown RBP20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 L2HGDHQ9H9P8 463 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 ANGPTL2Q9UKU9 493 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 GJB1P08034 283 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 CCL23P55773 120 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 SH2D3CQ8N5H7 860 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 CAPNS2Q96L46 248 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 GRID1Q9ULK0 1009 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 MYL2P10916 166 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 CKBP12277 381 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 TNFSF9P41273 254 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 MEA1Q16626 185 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 NOMO2Q5JPE7 1267 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 MRNIPQ6NTE8 343 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 C3orf20Q8ND61 904 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 NAT9Q9BTE0 207 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 NR2E3Q9Y5X4 410 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 ATRNL1Q5VV63 1379 aa20.27■□□□□ 0.84
SEMA6C-201ENST00000341697 TCP11X1B4DZS4 312 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 ADCY6O43306 1168 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 ELNP15502 786 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 CHN1P15882 459 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 PAX3P23760 479 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 MDH1P40925 334 aaKnown RBP20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 RHOAP61586 193 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 ACAP1Q15027 740 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 GBP5Q96PP8 586 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 TMEM51Q9NW97 253 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 SLC39A10Q9ULF5 831 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 LRRC37A3O60309 1634 aa20.27■□□□□ 0.83
SEMA6C-201ENST00000341697 E5RJQ4 531 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 RHOBTB1O94844 696 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 IFNA8P32881 189 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 KAT5Q92993 513 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 ZNF558Q96NG5 402 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 B4GALT5O43286 388 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 MAPRE2Q15555 327 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 ZIM3Q96PE6 472 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 POPDC2Q9HBU9 364 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 CASS4Q9NQ75 786 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 PPP1R37O75864 691 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 BMP6P22004 513 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 GRM5P41594 1212 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 CNGA2Q16280 664 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 ARSHQ5FYA8 562 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 EPS8L1Q8TE68 723 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 ATXN3LQ9H3M9 355 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 CBX4O00257 560 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 XYLBO75191 536 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 UPF1Q92900 1129 aaKnown RBP eCLIP20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 DEFB118Q96PH6 123 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 KCTD10Q9H3F6 313 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 CD274Q9NZQ7 290 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 ICAM3P32942 547 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 SFSWAPQ12872 951 aaKnown RBP20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 HS6ST3Q8IZP7 471 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 CLEC4DQ8WXI8 215 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 IPPQ9Y573 584 aa20.26■□□□□ 0.83
SEMA6C-201ENST00000341697 PRPF4O43172 522 aaKnown RBP eCLIP20.25■□□□□ 0.831e-6■□□□□ 8.9
SEMA6C-201ENST00000341697 LTFP02788 710 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 PRKCIP41743 596 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 CAPRIN1Q14444 709 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 MROH9Q5TGP6 573 aa20.25■□□□□ 0.83
SEMA6C-201ENST00000341697 EEF1DP3Q658K8 133 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms