RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 MYCLP1P12525 358 aaPredicted RBP3.73□□□□□ -1.81
CCDC66-202ENST00000341455 KCNA5P22460 613 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 NR2F2P24468 414 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 TBXAS1P24557 533 aaPredicted RBP3.73□□□□□ -1.81
CCDC66-202ENST00000341455 CASP1P29466 404 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 FMO5P49326 533 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 NDUFV1P49821 464 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 CLCN4P51793 760 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 NFKB2Q00653 900 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 TBX2Q13207 712 aaPredicted RBP3.73□□□□□ -1.81
CCDC66-202ENST00000341455 NR1I3Q14994 352 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 CFAP221Q4G0U5 840 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 C10orf62Q5T681 223 aaPredicted RBP3.73□□□□□ -1.81
CCDC66-202ENST00000341455 KRT39Q6A163 491 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 TWF2Q6IBS0 349 aaKnown RBP3.73□□□□□ -1.81
CCDC66-202ENST00000341455 C11orf57Q6ZUT1 292 aaPredicted RBP3.73□□□□□ -1.81
CCDC66-202ENST00000341455 SPATC1Q76KD6 591 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 TRAPPC11Q7Z392 1133 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 BNIPLQ7Z465 357 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 C11orf74Q86VG3 221 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 CBWD2Q8IUF1 395 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 TCEAL8Q8IYN2 117 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 MYO1HQ8N1T3 1032 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 MRPL43Q8N983 215 aaKnown RBP3.73□□□□□ -1.81
CCDC66-202ENST00000341455 LEMD2Q8NC56 503 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 C3orf58Q8NDZ4 430 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 ARNTL2Q8WYA1 636 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 POMGNT1Q8WZA1 660 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 ANKRD36BP1Q96IX9 119 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 MYRFLQ96LU7 910 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 NELL2Q99435 816 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 SH2D3AQ9BRG2 576 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 DPP3Q9NY33 737 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 PFDN2Q9UHV9 154 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 FRMD4BQ9Y2L6 1034 aa3.73□□□□□ -1.81
CCDC66-202ENST00000341455 CXorf51AA0A1B0GTR3 108 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 LCHNA4D1U4 455 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 MEIS3P2A8K0S8 358 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TISP43B9A030 160 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 H0Y626 953 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TRAPPC3O43617 180 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 CILPO75339 1184 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 FGF18O76093 207 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 EPN2O95208 641 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TRIM16O95361 564 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 AFPP02771 609 aaKnown RBP3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ACRP10323 421 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 FGFR4P22455 802 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 DNAJB1P25685 340 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 PRKCIP41743 596 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 LHX1P48742 406 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TAF6P49848 677 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TUBP50607 506 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 LILRA4P59901 499 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 PPP3CAQ08209 521 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TMEM62Q0P6H9 643 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ADAM9Q13443 819 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ZNF268Q14587 947 aaPredicted RBP3.72□□□□□ -1.81
CCDC66-202ENST00000341455 STILQ15468 1287 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 VWA3BQ502W6 1294 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 RAB41Q5JT25 222 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 PPP1R2P3Q6NXS1 205 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 FUT10Q6P4F1 479 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ZNF280BQ86YH2 543 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 SYNPOQ8N3V7 929 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 APPL2Q8NEU8 664 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 RASSF8Q8NHQ8 419 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 DNASE1L2Q92874 299 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 HPS3Q969F9 1004 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 KLHL5Q96PQ7 755 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 UIMC1Q96RL1 719 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 LRRC3Q9BY71 257 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 CXCL16Q9H2A7 254 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ZFP64Q9NPA5 681 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ASNSD1Q9NWL6 643 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ACTR10Q9NZ32 417 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ZIM2Q9NZV7 527 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TUBGCP4Q9UGJ1 667 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 CDH9Q9ULB4 789 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TLR6Q9Y2C9 796 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ASB3Q9Y575 518 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 PCDHB12Q9Y5F1 795 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 A0A087WWV3 80 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 SERTM1A2A2V5 107 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 CLASP2O75122 1294 aaKnown RBP3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ZDHHC11BP0C7U3 371 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ODC1P11926 461 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 GSTT1P30711 240 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 PPP3CCP48454 512 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 CASP4P49662 377 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 SCNN1GP51170 649 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 YWHAEP62258 255 aaKnown RBP3.72□□□□□ -1.81
CCDC66-202ENST00000341455 NOP14P78316 857 aaKnown RBP3.72□□□□□ -1.81
CCDC66-202ENST00000341455 GPR17Q13304 367 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 PLD1Q13393 1074 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 EIF4EBP2Q13542 120 aaPredicted RBP3.72□□□□□ -1.81
CCDC66-202ENST00000341455 TRIM14Q14142 442 aa3.72□□□□□ -1.81
CCDC66-202ENST00000341455 MAPRE1Q15691 268 aaKnown RBP3.72□□□□□ -1.81
CCDC66-202ENST00000341455 ZRSR2Q15696 482 aaKnown RBP3.72□□□□□ -1.81
CCDC66-202ENST00000341455 USP41Q3LFD5 358 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms