RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZSCAN32Q9NX65 697 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 GMIPQ9P107 970 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 RWDD2AQ9UIY3 292 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 CACNA1IQ9P0X4 2223 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 FANCMQ8IYD8 2048 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 MYH10P35580 1976 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 ZFHX2Q9C0A1 2572 aaPredicted RBP14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 E2F8A0AVK6 867 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 OTOL1A6NHN0 477 aaPredicted RBP14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 HHLA1C9JL84 531 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 COCHO43405 550 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 TLR5O60602 858 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 LMNAP02545 664 aaKnown RBP14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 GJA4P35212 333 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 CXCL12P48061 93 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 RAD23BP54727 409 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 GOLGA8FQ08AF8 430 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 GOLGA8DPQ0D2H9 430 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 ZNF394Q53GI3 561 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 PPP1R26Q5T8A7 1209 aaPredicted RBP14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 CCDC186Q7Z3E2 898 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 TRIM59Q8IWR1 403 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 ZNF276Q8N554 614 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 SLC4A11Q8NBS3 891 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 ZBTB44Q8NCP5 570 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 TTC16Q8NEE8 873 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 ARID3AQ99856 593 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 P2RY13Q9BPV8 354 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 CYLDQ9NQC7 956 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 CHORDC1Q9UHD1 332 aaPredicted RBP14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 WNT6Q9Y6F9 365 aa14.07□□□□□ -0.16
SIRPB3P-201ENST00000340424 ADH1CP00326 375 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 ACO1P21399 889 aaKnown RBP14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 KIF11P52732 1056 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 BCAT1P54687 386 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 ZXDBP98169 803 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 GCNT1Q02742 428 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 CAMK4Q16566 473 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 SGO2Q562F6 1265 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 SMYD5Q6GMV2 418 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 ARHGAP18Q8N392 663 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 ANKRD52Q8NB46 1076 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 CD101Q93033 1021 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 SRRTQ9BXP5 876 aaKnown RBP14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 CLSTN2Q9H4D0 955 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 CCSER2Q9H7U1 834 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 SMPD4Q9NXE4 827 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 CLIC5Q9NZA1 410 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 CFAP97Q9P2B7 532 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 HESX1Q9UBX0 185 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 USP3Q9Y6I4 520 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 R4GN57 208 aa14.06□□□□□ -0.16
SIRPB3P-201ENST00000340424 AFPP02771 609 aaKnown RBP14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 PAEPP09466 180 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 VDRP11473 427 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 TDGF1P13385 188 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 PRKCSHP14314 528 aaPredicted RBP14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 HOXA6P31267 233 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 ATP5C1P36542 298 aaKnown RBP14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 EIF2DP41214 584 aaKnown RBP14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 STX17P56962 302 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 KCNH2Q12809 1159 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 STILQ15468 1287 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 FSTL4Q6MZW2 842 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 ASCL5Q7RTU5 278 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 GPRIN1Q7Z2K8 1008 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 ADGRG2Q8IZP9 1017 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 UBR7Q8N806 425 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 JAKMIP2Q96AA8 810 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 CHFRQ96EP1 664 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 ZFRQ96KR1 1074 aaKnown RBP14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 FAM81BQ96LP2 452 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 RBM12Q9NTZ6 932 aaKnown RBP14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 DACH1Q9UI36 760 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 SH3BP1Q9Y3L3 701 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 MYO16Q9Y6X6 1858 aa14.05□□□□□ -0.16
SIRPB3P-201ENST00000340424 CHURC1-FNTBB4DL54 471 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 CYP26A1O43174 497 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 LILRB5O75023 590 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 RALAP11233 206 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 GALK1P51570 392 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 GAS6Q14393 721 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 PREPLQ4J6C6 727 aaPredicted RBP14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 RAB41Q5JT25 222 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 Q6ZS52 159 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 PPM1KQ8N3J5 372 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 LMO3Q8TAP4 145 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 GBP4Q96PP9 640 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 LINC00597Q9H2U6 94 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 DNMT3LQ9UJW3 386 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 LSM7Q9UK45 103 aaKnown RBP14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 TSPAN16Q9UKR8 245 aa14.04□□□□□ -0.16
SIRPB3P-201ENST00000340424 CFAP54Q96N23 3096 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 XPO1O14980 1071 aaKnown RBP14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 CYP17A1P05093 508 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 SETSIPP0DME0 302 aa14.03□□□□□ -0.16
SIRPB3P-201ENST00000340424 CD19P15391 556 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms