RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 LRRC49Q8IUZ0 686 aa7.51□□□□□ -1.21
NUP43-201ENST00000340413 PPP1R2P1Q96PQ5 205 aa7.51□□□□□ -1.21
NUP43-201ENST00000340413 ACP6Q9NPH0 428 aa7.51□□□□□ -1.21
NUP43-201ENST00000340413 GDF3Q9NR23 364 aa7.51□□□□□ -1.21
NUP43-201ENST00000340413 INPP5FQ9Y2H2 1132 aa7.51□□□□□ -1.21
NUP43-201ENST00000340413 PLXNA4Q9HCM2 1894 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.5□□□□□ -1.21
NUP43-201ENST00000340413 C3orf70A6NLC5 250 aaPredicted RBP7.5□□□□□ -1.21
NUP43-201ENST00000340413 GJB5O95377 273 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 CCDC130P13994 396 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 HOXC13P31276 330 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 NDUFV1P49821 464 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 CCDC14Q49A88 953 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 CTXN3Q4LDR2 81 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 DCAF12L1Q5VU92 463 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 KCNT2Q6UVM3 1135 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 IFT20Q8IY31 132 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 TCEAL8Q8IYN2 117 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 NUP93Q8N1F7 819 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 ZMIZ2Q8NF64 920 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 OR10T2Q8NGX3 314 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 FAM84AQ96KN4 292 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 HAPLN3Q96S86 360 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 FRMD8Q9BZ67 464 aaPredicted RBP7.5□□□□□ -1.21
NUP43-201ENST00000340413 VIPAS39Q9H9C1 493 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 hCG_1818297A0A087WSY0 165 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 WASH4PA8MWX3 477 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 TCF3P15923 654 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 RFC1P35251 1148 aaPredicted RBP7.5□□□□□ -1.21
NUP43-201ENST00000340413 KRT17Q04695 432 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 SIX1Q15475 284 aaPredicted RBP7.5□□□□□ -1.21
NUP43-201ENST00000340413 ZNF394Q53GI3 561 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 SPOCD1Q6ZMY3 1216 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 MREGQ8N565 214 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 PPP1R13LQ8WUF5 828 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 RXFP2Q8WXD0 754 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 RTP4Q96DX8 246 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 C1orf74Q96LT6 269 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 ARHGEF38Q9NXL2 777 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 LTFP02788 710 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 CTSAP10619 480 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 PDGFRAP16234 1089 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 DDX6P26196 483 aaKnown RBP eCLIP7.5□□□□□ -1.21
NUP43-201ENST00000340413 BRCC3P46736 316 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 CXCR3P49682 368 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 ARL13BQ3SXY8 428 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 TMEM240Q5SV17 173 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 SLC9A4Q6AI14 798 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 SND1Q7KZF4 910 aaKnown RBP eCLIP7.5□□□□□ -1.21
NUP43-201ENST00000340413 COG1Q8WTW3 980 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 CAVIN3Q969G5 261 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 SCLYQ96I15 445 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 PPP1R12CQ9BZL4 782 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 ZBP1Q9H171 429 aa7.5□□□□□ -1.21
NUP43-201ENST00000340413 HBS1LQ9Y450 684 aaKnown RBP7.5□□□□□ -1.21
NUP43-201ENST00000340413 MYBPHLA2RUH7 354 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 NCAM2O15394 837 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 PRPSAP2O60256 369 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 CEP104O60308 925 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 GABBR2O75899 941 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 ITGAVP06756 1048 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 KDELR1P24390 212 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 ADORA2BP29275 332 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 CDKN2BP42772 138 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 TKTL1P51854 596 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 CCL23P55773 120 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 LONRF2Q1L5Z9 754 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 ERMARDQ5T6L9 678 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 EMBQ6PCB8 327 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 PDZD4Q76G19 769 aaPredicted RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 FIBCD1Q8N539 461 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 C12orf29Q8N999 325 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 UBA3Q8TBC4 463 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 ALG3Q92685 438 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 SERPINB11Q96P15 392 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 UBE2OQ9C0C9 1292 aaKnown RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 USP18Q9UMW8 372 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 HELZP42694 1942 aaKnown RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 MTMR11A4FU01 709 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 PDGFRBP09619 1106 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 LINC00271P0C7V0 271 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 CSH1P0DML2 217 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 CSH2P0DML3 217 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 OGDHQ02218 1023 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 PTK6Q13882 451 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 PSMD5Q16401 504 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 C5orf22Q49AR2 442 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 CCDC149Q6ZUS6 474 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 ITIH5Q86UX2 942 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 RNF169Q8NCN4 708 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 HAUS1Q96CS2 278 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 TMEM169Q96HH4 297 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 OSBPL8Q9BZF1 889 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 FAM49BQ9NUQ9 324 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 STIM2Q9P246 746 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 FZD10Q9ULW2 581 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 TFR2Q9UP52 801 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 MTCL1Q9Y4B5 1905 aaKnown RBP7.49□□□□□ -1.21
NUP43-201ENST00000340413 OBSL1O75147 1896 aa7.49□□□□□ -1.21
NUP43-201ENST00000340413 APOC4-APOC2K7ER74 178 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms