RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 TSC2P49815 1807 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TRDMT1O14717 391 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 GCATO75600 419 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 IFNB1P01574 187 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TPSB2P20231 275 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HDAC4P56524 1084 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TPSAB1Q15661 275 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FBXO47Q5MNV8 452 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FNBP1LQ5T0N5 605 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HSPH1Q92598 858 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CYTH2Q99418 400 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KATNAL1Q9BW62 490 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KCNK9Q9NPC2 374 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SETD4Q9NVD3 440 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MKS1Q9NXB0 559 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PCSK1NQ9UHG2 260 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 XPO7Q9UIA9 1087 aaKnown RBP11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SNX9Q9Y5X1 595 aa11.17□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HACD1B0YJ81 288 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ADCY6O43306 1168 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CSDE1O75534 798 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 GABBR2O75899 941 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 C1QAP02745 245 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RPLP2P05387 115 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ZNF865P0CJ78 1059 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CPT1AP50416 773 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CRYBB1P53674 252 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MAP2K5Q13163 448 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TAF5Q15542 800 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SV2CQ496J9 727 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 UBXN11Q5T124 520 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NUGGCQ68CJ6 796 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CDKL3Q8IVW4 592 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FAM172AQ8WUF8 416 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DCAKDQ8WVC6 231 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KCTD13Q8WZ19 329 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NT5C3BQ969T7 300 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CALN1Q9BXU9 219 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 VPS37BQ9H9H4 285 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RXFP1Q9HBX9 757 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 XPO1O14980 1071 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RECQL4O94761 1208 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 AIF1P55008 147 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PDE4CQ08493 712 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 BNIP1Q12981 228 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ORC1Q13415 861 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 RIPK1Q13546 671 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KIZQ2M2Z5 673 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MSS51Q4VC12 460 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HACE1Q8IYU2 909 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 C12orf29Q8N999 325 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FBXO36Q8NEA4 188 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PCDH19Q8TAB3 1148 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SLC44A1Q8WWI5 657 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PIWIL1Q96J94 861 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SNRNP25Q9BV90 132 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 EIF2AQ9BY44 585 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 VPS11Q9H270 941 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FGFR1OP2Q9NVK5 253 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SAE1Q9UBE0 346 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TUBGCP4Q9UGJ1 667 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CYP2C9P11712 490 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 ALADP13716 330 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PRKCHP24723 683 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HNRNPH1P31943 449 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 IFNAR2P48551 515 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TAF6P49848 677 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DYNLT1P63172 113 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 NKX3-2P78367 333 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CDK16Q00536 496 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SLC18A2Q05940 514 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 KRT81Q14533 505 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MFSD10Q14728 455 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SNX17Q15036 470 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SPRED3Q2MJR0 410 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 C15orf59Q2T9L4 293 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 EFHC1Q5JVL4 640 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 CGB2Q6NT52 195 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 DARS2Q6PI48 645 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 C3orf62Q6ZUJ4 267 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SH2D5Q6ZV89 423 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 BZW1Q7L1Q6 419 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FUKQ8N0W3 1084 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 FAM71DQ8N9W8 422 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 TNIP3Q96KP6 325 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 HNRNPABQ99729 332 aaKnown RBP11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 USP3Q9Y6I4 520 aa11.16□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SMIM28A0A1B0GU29 152 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 H0YHG0 523 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 MGRN1O60291 552 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 L1CAMP32004 1257 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PSEN2P49810 448 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 BCAR1P56945 870 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 LRRC14Q15048 493 aa11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 PKN2Q16513 984 aaKnown RBP11.15□□□□□ -0.62
TRAF3IP2-201ENST00000340026 SWT1Q5T5J6 900 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms