RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TRIM66O15016 1216 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 ADAM12O43184 909 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 PRPSAP2O60256 369 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 DAB1O75553 588 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 TRUB2O95900 331 aaKnown RBP15.37■□□□□ 0.05
CBX3-201ENST00000337620 GLI1P08151 1106 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 OR1D2P34982 312 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 MGAT5BQ3V5L5 792 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 POLNQ7Z5Q5 900 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 KLHL7Q8IXQ5 586 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 RCOR2Q8IZ40 523 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 HERVK_113Q902F9 699 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 HSPH1Q92598 858 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 KRT12Q99456 494 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 HEMGNQ9BXL5 484 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 NR2E1Q9Y466 385 aa15.37■□□□□ 0.05
CBX3-201ENST00000337620 TCRBV7S2A1N4TA0A589 114 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 LRRD1A4D1F6 860 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 TNFRSF10BO14763 440 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 SOAT2O75908 522 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 LTFP02788 710 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 NOS2P35228 1153 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 CETN2P41208 172 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 MAGEA11P43364 429 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 GLUD2P49448 558 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 SULT1E1P49888 294 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 MRPS25P82663 173 aaKnown RBP15.36■□□□□ 0.05
CBX3-201ENST00000337620 SMARCB1Q12824 385 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 SYPL2Q5VXT5 272 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 PM20D1Q6GTS8 502 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 DDX53Q86TM3 631 aaKnown RBP15.36■□□□□ 0.05
CBX3-201ENST00000337620 HERC6Q8IVU3 1022 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 GPR161Q8N6U8 529 aaKnown RBP15.36■□□□□ 0.05
CBX3-201ENST00000337620 STKLD1Q8NE28 680 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 SPPL2BQ8TCT7 592 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 RAPGEF5Q92565 580 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 RBM41Q96IZ5 413 aaKnown RBP15.36■□□□□ 0.05
CBX3-201ENST00000337620 TBCBQ99426 244 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 SEPT5Q99719 369 aaPredicted RBP15.36■□□□□ 0.05
CBX3-201ENST00000337620 NAALADL1Q9UQQ1 740 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 BACE2Q9Y5Z0 518 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 USP3Q9Y6I4 520 aa15.36■□□□□ 0.05
CBX3-201ENST00000337620 SYNJ2BP-COX16A0A087WUM0 186 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 GOLGA6L10A0A0M3HER8 536 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 TLL1O43897 1013 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 RALAP11233 206 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 NCAM1P13591 858 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 ATP2A2P16615 1042 aaKnown RBP15.35■□□□□ 0.05
CBX3-201ENST00000337620 PPM1AP35813 382 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 ATXN1P54253 815 aaKnown RBP15.35■□□□□ 0.05
CBX3-201ENST00000337620 HDAC4P56524 1084 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 ROR1Q01973 937 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 DSG1Q02413 1049 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 DUSP4Q13115 394 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 SLC25A52Q3SY17 297 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 SLC8B1Q6J4K2 584 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 MFSD7Q6UXD7 560 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 VPS52Q8N1B4 723 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 GPR152Q8TDT2 470 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 C8orf48Q96LL4 319 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 SLITRK1Q96PX8 696 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 SLC2A13Q96QE2 648 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 PEBP4Q96S96 227 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 RAD9AQ99638 391 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 LRRC1Q9BTT6 524 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 HERC2P3Q9BVR0 1158 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 ADAM33Q9BZ11 813 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 CRISPLD1Q9H336 500 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 COX16Q9P0S2 106 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 WDR27A2RRH5 827 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 CCDC188H7C350 402 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 VNN2O95498 520 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 FYNP06241 537 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 RARAP10276 462 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 DNAJB2P25686 324 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 KRT17Q04695 432 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 KAZNQ674X7 775 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 CCDC70Q6NSX1 233 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 BHLHA9Q7RTU4 235 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 ANKS1BQ7Z6G8 1248 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 NUP93Q8N1F7 819 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 KCTD6Q8NC69 237 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 IRGQQ8WZA9 623 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 EDEM1Q92611 657 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 CENPIQ92674 756 aaPredicted RBP15.35■□□□□ 0.05
CBX3-201ENST00000337620 SLC9A7Q96T83 725 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 NCAPGQ9BPX3 1015 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 CLSTN3Q9BQT9 956 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 C11orf84Q9BUA3 381 aaPredicted RBP15.35■□□□□ 0.05
CBX3-201ENST00000337620 OSBPL8Q9BZF1 889 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 DDX47Q9H0S4 455 aaKnown RBP15.35■□□□□ 0.05
CBX3-201ENST00000337620 ANKZF1Q9H8Y5 726 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 MTUS1Q9ULD2 1270 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 STAP1Q9ULZ2 295 aa15.35■□□□□ 0.05
CBX3-201ENST00000337620 FSCN2O14926 492 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 FGF18O76093 207 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 URODP06132 367 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 PITX1P78337 314 aaPredicted RBP15.34■□□□□ 0.05
CBX3-201ENST00000337620 BSPRYQ5W0U4 402 aa15.34■□□□□ 0.05
CBX3-201ENST00000337620 C8orf74Q6P047 294 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms