RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.55□□□□□ -1.04
HPS4-201ENST00000336873 AK5Q9Y6K8 562 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 A0A0B4J269 797 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 C19orf81C9J6K1 198 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 H3BRB1 525 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 EDN1P05305 212 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 GSTA1P08263 222 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 GSTA2P09210 222 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 ATP4AP20648 1035 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 POU5F1Q01860 360 aaKnown RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 GBE1Q04446 702 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 MON1BQ7L1V2 547 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 MYLK4Q86YV6 388 aaPredicted RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 WDR75Q8IWA0 830 aaKnown RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 PPWD1Q96BP3 646 aaKnown RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 ZNF669Q96BR6 464 aaPredicted RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 TLCD1Q96CP7 247 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 NACA2Q9H009 215 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 CDT1Q9H211 546 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 TUT1Q9H6E5 874 aaKnown RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 C17orf75Q9HAS0 396 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 DDX56Q9NY93 547 aaKnown RBP8.55□□□□□ -1.04
HPS4-201ENST00000336873 ARHGAP28Q9P2N2 729 aa8.55□□□□□ -1.04
HPS4-201ENST00000336873 CNTNAP1P78357 1384 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 MAP1BP46821 2468 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 WDR27A2RRH5 827 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 TMEM191CA6NGB0 347 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 TTC36A6NLP5 189 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 DNAJC6O75061 913 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 ERVK-10P10266 1014 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 NCAM1P13591 858 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 RPS12P25398 132 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 ASPHQ12797 758 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 CUL3Q13618 768 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 DPYSL3Q14195 570 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 TCHHL1Q5QJ38 904 aaPredicted RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 CAPRIN2Q6IMN6 1127 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 KCNT2Q6UVM3 1135 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 METTL7BQ6UX53 244 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 C4orf50Q6ZRC1 276 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 BRSK2Q8IWQ3 736 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 SAMD3Q8N6K7 520 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 PDCD6IPQ8WUM4 868 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 E2F7Q96AV8 911 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 SMARCAD1Q9H4L7 1026 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 RXFP1Q9HBX9 757 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 ERAP1Q9NZ08 941 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 SCN7AQ01118 1682 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 LAMB1P07942 1786 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 hCG_1818297A0A087WSY0 165 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 TMEM63AO94886 807 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 ASS1P00966 412 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 NOVP48745 357 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 NME5P56597 212 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 BEX3Q00994 111 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 C1QBPQ07021 282 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 NR1H3Q13133 447 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 KPNB1Q14974 876 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 MMEL1Q495T6 779 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 CATSPERGQ6ZRH7 1159 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 DNAJB3Q8WWF6 145 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 MARK4Q96L34 752 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 ZNF317Q96PQ6 595 aaPredicted RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 SRPK1Q96SB4 655 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 APOBEC2Q9Y235 224 aaKnown RBP8.54□□□□□ -1.04
HPS4-201ENST00000336873 CDK5RAP2Q96SN8 1893 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 RREB1Q92766 1687 aa8.54□□□□□ -1.04
HPS4-201ENST00000336873 TCRBV9S1A1TA0A576 114 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 PMPCBO75439 489 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 FARP2O94887 1054 aaPredicted RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 C6orf222P0C671 652 aaPredicted RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 ENO3P13929 434 aaPredicted RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 SERPINB5P36952 375 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 PLK1P53350 603 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 MAP3K7CLP57077 242 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 FKBP1AP62942 108 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 RBP5P82980 135 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 PLIN5Q00G26 463 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 BTKQ06187 659 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 STX3Q13277 289 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 MAP7D1Q3KQU3 841 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ANKRD20A2Q5SQ80 823 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ANKRD20A1Q5TYW2 823 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 TRMT10BQ6PF06 316 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 FAM183BPQ6ZVS7 135 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 TRABD2AQ86V40 505 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ZNF677Q86XU0 584 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 PNPLA1Q8N8W4 532 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 STKLD1Q8NE28 680 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 RAB3IL1Q8TBN0 382 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 SLC2A14Q8TDB8 520 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 DDX1Q92499 740 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 GBP5Q96PP8 586 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 TIPINQ9BVW5 301 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CYP4F12Q9HCS2 524 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms