RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CYB5D1Q6P9G0 228 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 ZNF438Q7Z4V0 828 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 SLC26A11Q86WA9 606 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 HDHD2Q9H0R4 259 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 ELP3Q9H9T3 547 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 CYP3A43Q9HB55 503 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 DPP3Q9NY33 737 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 HEY2Q9UBP5 337 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 ZNF609O15014 1411 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 PIPSLA2A3N6 862 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 FAM25AB3EWG3 89 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 FAM25CB3EWG5 89 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 FAM25GB3EWG6 89 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 TRIM66O15016 1216 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 RASA1P20936 1047 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 LRRC34Q8IZ02 419 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 KIF2BQ8N4N8 673 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 MDM1Q8TC05 714 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 MAGED4Q96JG8 741 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 CDK5RAP1Q96SZ6 601 aaKnown RBP13.49□□□□□ -0.25
HLCS-201ENST00000336648 IL1RL2Q9HB29 575 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 NCKIPSDQ9NZQ3 722 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 ADCY10Q96PN6 1610 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 FAM47E-STBD1D6RA91 191 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 CETPP11597 493 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 CHI3L1P36222 383 aaPredicted RBP13.49□□□□□ -0.25
HLCS-201ENST00000336648 CCT3P49368 545 aaKnown RBP13.49□□□□□ -0.25
HLCS-201ENST00000336648 DNAJC3Q13217 504 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 ANKS6Q68DC2 871 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 POLG2Q9UHN1 485 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 DGKIO75912 1065 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 CSF1RP07333 972 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 RCN1Q15293 331 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 TRMT5Q32P41 509 aaKnown RBP13.49□□□□□ -0.25
HLCS-201ENST00000336648 GPRC5AQ8NFJ5 357 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 EXD1Q8NHP7 514 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 JMJD4Q9H9V9 463 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 AP3M1Q9Y2T2 418 aa13.49□□□□□ -0.25
HLCS-201ENST00000336648 MPOP05164 745 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 NAMPTP43490 491 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 TSC22D1Q15714 1073 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 KLHL17Q6TDP4 642 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 LAYNQ6UX15 382 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 ARHGAP22Q7Z5H3 698 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 KLF6Q99612 283 aaPredicted RBP13.48□□□□□ -0.25
HLCS-201ENST00000336648 CELF4Q9BZC1 486 aaKnown RBP13.48□□□□□ -0.25
HLCS-201ENST00000336648 PCDHB7Q9Y5E2 793 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 SNAP23O00161 211 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 TEX28O15482 410 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 LRG1P02750 347 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 JAK1P23458 1154 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 RPL10AP62906 217 aaKnown RBP13.48□□□□□ -0.25
HLCS-201ENST00000336648 ZC2HC1CQ53FD0 456 aaPredicted RBP13.48□□□□□ -0.25
HLCS-201ENST00000336648 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 SYCP2LQ5T4T6 812 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 UBA3Q8TBC4 463 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 KLHL4Q9C0H6 718 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 TMBIM4Q9HC24 238 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 TBC1D13Q9NVG8 400 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 RRN3Q9NYV6 651 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 RPS6KB2Q9UBS0 482 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 M0QYT0 321 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 GRAP2O75791 330 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 SCARF1Q14162 830 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 C1orf131Q8NDD1 294 aaKnown RBP13.48□□□□□ -0.25
HLCS-201ENST00000336648 PRDM5Q9NQX1 630 aaPredicted RBP13.48□□□□□ -0.25
HLCS-201ENST00000336648 DDIT4Q9NX09 232 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 KLHL3Q9UH77 587 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 GPR182O15218 404 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 BMP10O95393 424 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 BCAT1P54687 386 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 ATP12AP54707 1039 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 NFYCQ13952 458 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 CDC42EP5Q6NZY7 148 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 OLFML1Q6UWY5 402 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 SVOPQ8N4V2 548 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
HLCS-201ENST00000336648 CLPBQ9H078 707 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 KCNH7Q9NS40 1196 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 ATAD3AQ9NVI7 634 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 SLC25A13Q9UJS0 675 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 RUVBL2Q9Y230 463 aaKnown RBP13.48□□□□□ -0.25
HLCS-201ENST00000336648 ABCA8O94911 1581 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 ZBTB39O15060 712 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 NPTXRO95502 500 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 OR1G1P47890 313 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 SLC16A1P53985 500 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 PLIN5Q00G26 463 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 CCNG2Q16589 344 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 NEK10Q6ZWH5 1172 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 VTI1BQ9UEU0 232 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 LNPEPQ9UIQ6 1025 aa13.48□□□□□ -0.25
HLCS-201ENST00000336648 TET3O43151 1660 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 GHRP10912 638 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 IRF1P10914 325 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 DARSP14868 501 aaKnown RBP13.47□□□□□ -0.25
HLCS-201ENST00000336648 ZNF284Q2VY69 593 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 ATP6AP1LQ52LC2 224 aa13.47□□□□□ -0.25
HLCS-201ENST00000336648 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms