RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 SLC13A1Q9BZW2 595 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 IKBKGQ9Y6K9 419 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 SPDYE5A6NIY4 337 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 H3BRB1 525 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 PRPF4O43172 522 aaKnown RBP eCLIP15.47■□□□□ 0.075e-12■□□□□ 9.5
UBA1-201ENST00000335972 MCF2P10911 925 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 ERFP50548 548 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 CRADDP78560 199 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 PRAMEF19Q5SWL8 479 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 TAPT1Q6NXT6 567 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 UNC5BQ8IZJ1 945 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 PYROXD2Q8N2H3 581 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 PQLC3Q8N755 202 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 UTP4Q969X6 686 aaKnown RBP15.47■□□□□ 0.07
UBA1-201ENST00000335972 OSMRQ99650 979 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 DHX35Q9H5Z1 703 aaKnown RBP15.47■□□□□ 0.07
UBA1-201ENST00000335972 TUT1Q9H6E5 874 aaKnown RBP15.47■□□□□ 0.07
UBA1-201ENST00000335972 RSAD1Q9HA92 442 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 WDR35Q9P2L0 1181 aa15.47■□□□□ 0.07
UBA1-201ENST00000335972 BGNP21810 368 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 RBP5P82980 135 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 SETDB1Q15047 1291 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 TAF1BQ53T94 588 aaPredicted RBP15.46■□□□□ 0.07
UBA1-201ENST00000335972 MTHFD1LQ6UB35 978 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 PCGF5Q86SE9 256 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 MPP5Q8N3R9 675 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 LPXNO60711 386 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 ZBED1O96006 694 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 OSBPP22059 807 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 MAP2K2P36507 400 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 NOMO1Q15155 1222 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 CDHR3Q6ZTQ4 885 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 TDRPQ86YL5 185 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 FNIP1Q8TF40 1166 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 RNF157Q96PX1 679 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 SLC24A2Q9UI40 661 aa15.46■□□□□ 0.07
UBA1-201ENST00000335972 SMG5Q9UPR3 1016 aaKnown RBP15.46■□□□□ 0.07
UBA1-201ENST00000335972 PAPSS1O43252 624 aaPredicted RBP15.46■□□□□ 0.06
UBA1-201ENST00000335972 IGFBP6P24592 240 aaPredicted RBP15.46■□□□□ 0.06
UBA1-201ENST00000335972 LMO2P25791 158 aa15.46■□□□□ 0.06
UBA1-201ENST00000335972 NR1H3Q13133 447 aa15.46■□□□□ 0.06
UBA1-201ENST00000335972 CEP128Q6ZU80 1094 aa15.46■□□□□ 0.06
UBA1-201ENST00000335972 ZMYND8Q9ULU4 1186 aaPredicted RBP15.46■□□□□ 0.06
UBA1-201ENST00000335972 E2F8A0AVK6 867 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 INHBAP08476 426 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 P4HA1P13674 534 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 PREPLQ4J6C6 727 aaPredicted RBP15.45■□□□□ 0.06
UBA1-201ENST00000335972 RNF43Q68DV7 783 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 ADGRD1Q6QNK2 874 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 NXF3Q9H4D5 531 aaKnown RBP15.45■□□□□ 0.06
UBA1-201ENST00000335972 USP29Q9HBJ7 922 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 PCDH18Q9HCL0 1135 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 H0Y3Z8 333 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 SDC4P31431 198 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 TRMT10BQ6PF06 316 aaKnown RBP15.45■□□□□ 0.06
UBA1-201ENST00000335972 MAMDC4Q6UXC1 1216 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 C16orf70Q9BSU1 422 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 FBXO6Q9NRD1 293 aaPredicted RBP15.45■□□□□ 0.06
UBA1-201ENST00000335972 ETNK2Q9NVF9 386 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 IL1RAPL1Q9NZN1 696 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 CFAP73A6NFT4 308 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 TRIM49D1C9J1S8 452 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 METTL18O95568 372 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 EPHB2P29323 1055 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 GMPRP36959 345 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 GRIK4Q16099 956 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 TAZQ16635 292 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 NLRP9Q7RTR0 991 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 MZB1Q8WU39 189 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 C10orf82Q8WW14 230 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 GBA2Q9HCG7 927 aaPredicted RBP15.45■□□□□ 0.06
UBA1-201ENST00000335972 MARCOQ9UEW3 520 aaPredicted RBP15.45■□□□□ 0.06
UBA1-201ENST00000335972 MAGED2Q9UNF1 606 aaPredicted RBP15.45■□□□□ 0.06
UBA1-201ENST00000335972 STARD13Q9Y3M8 1113 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 MRPL42Q9Y6G3 142 aaKnown RBP15.45■□□□□ 0.06
UBA1-201ENST00000335972 USH1CQ9Y6N9 552 aa15.45■□□□□ 0.06
UBA1-201ENST00000335972 A8MXQ7 604 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 CYB561D2O14569 222 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 CXCL11O14625 94 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 ADCY6O43306 1168 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 UNC5CO95185 931 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 EZRP15311 586 aaKnown RBP15.44■□□□□ 0.06
UBA1-201ENST00000335972 YWHAZP63104 245 aaKnown RBP15.44■□□□□ 0.06
UBA1-201ENST00000335972 ZNF200P98182 395 aaPredicted RBP15.44■□□□□ 0.06
UBA1-201ENST00000335972 TNFAIP2Q03169 654 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 SLC10A2Q12908 348 aaPredicted RBP15.44■□□□□ 0.06
UBA1-201ENST00000335972 LCLAT1Q6UWP7 414 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 CATSPER4Q7RTX7 472 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 CCDC125Q86Z20 511 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 KHSRPQ92945 711 aaKnown RBP eCLIP15.44■□□□□ 0.06
UBA1-201ENST00000335972 CYTH2Q99418 400 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 ARHGEF3Q9NR81 526 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 SMYD2Q9NRG4 433 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 APOL1O14791 398 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 DIAPH2O60879 1101 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 ANP32DO95626 131 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 KITP10721 976 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 KLHL38Q2WGJ6 581 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 MDH1BQ5I0G3 518 aa15.44■□□□□ 0.06
UBA1-201ENST00000335972 ZNF484Q5JVG2 852 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms