RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ZC3H12AQ5D1E8 599 aaKnown RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 FAM160B1Q5W0V3 765 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 ANKRD13AQ8IZ07 590 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 ENDOVQ8N8Q3 282 aaKnown RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 C1orf127Q8N9H9 656 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 APOPT1Q96IL0 206 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 MPHOSPH6Q99547 160 aaKnown RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 BTBD10Q9BSF8 475 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 MAGEB5Q9BZ81 275 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 YIPF3Q9GZM5 350 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 TLE6Q9H808 572 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 PLAC1Q9HBJ0 212 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 SAR1AQ9NR31 198 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 SMYD2Q9NRG4 433 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 TAS2R1Q9NYW7 299 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 NR2E3Q9Y5X4 410 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 A0A0G2JLL6 359 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 KCNN4O15554 427 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 RNF8O76064 485 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 TNNC2P02585 160 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 LINGO3P0C6S8 592 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 GCKP35557 465 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 SERPINB4P48594 390 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 PSEN1P49768 467 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 RGS7P49802 495 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 CLCN3P51790 818 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 CDK16Q00536 496 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 KCNJ11Q14654 390 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 HSF5Q4G112 596 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 ZNF667Q5HYK9 610 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 WASHC2DQ5SRD0 308 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 WDR78Q5VTH9 848 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 NAIF1Q69YI7 327 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 SCYL2Q6P3W7 929 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 MOB2Q70IA6 237 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 PRRT2Q7Z6L0 340 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 SRPK1Q96SB4 655 aaKnown RBP12.83□□□□□ -0.36
VPS33B-201ENST00000333371 ADPGKQ9BRR6 497 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 PPCSQ9HAB8 311 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 NMRK1Q9NWW6 199 aa12.83□□□□□ -0.36
VPS33B-201ENST00000333371 IQANK1A0A1B0GTG1 560 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 DPPA5A6NC42 116 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 FCHO1O14526 889 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 AP3M2P53677 418 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 YWHAZP63104 245 aaKnown RBP12.82□□□□□ -0.36
VPS33B-201ENST00000333371 IRX4P78413 519 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 PTPN11Q06124 597 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-201ENST00000333371 ATF7IP2Q5U623 682 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 MAP1SQ66K74 1059 aaPredicted RBP12.82□□□□□ -0.36
VPS33B-201ENST00000333371 ARMC2Q8NEN0 867 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 UCMAQ8WVF2 138 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 ANKRD36BP1Q96IX9 119 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 NSL1Q96IY1 281 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 FETUBQ9UGM5 382 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 EFR3BQ9Y2G0 817 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 TTLL3Q9Y4R7 772 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.82□□□□□ -0.36
VPS33B-201ENST00000333371 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 ZNF638Q14966 1978 aaKnown RBP12.82□□□□□ -0.36
VPS33B-201ENST00000333371 GPR25O00155 361 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 CCDC22O60826 627 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 C1QAP02745 245 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 CYP3A5P20815 502 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 RBL1P28749 1068 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 NOMO1Q15155 1222 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 CA9Q16790 459 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 MPZL3Q6UWV2 235 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 TREML1Q86YW5 311 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPS33B-201ENST00000333371 C12orf29Q8N999 325 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 ACAP3Q96P50 834 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 C20orf27Q9GZN8 174 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 LHX5Q9H2C1 402 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 ARHGEF4Q9NR80 690 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 CNTN3Q9P232 1028 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 SCN1AP35498 2009 aa12.82□□□□□ -0.36
VPS33B-201ENST00000333371 CCDC189A1A4V9 331 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 SPDYE5A6NIY4 337 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 COPEO14579 308 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CXCL11O14625 94 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 HMGCRP04035 888 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 APRTP07741 180 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 PDGFRAP16234 1089 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 EFNA5P52803 228 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 MRPS5P82675 430 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 SLC18A2Q05940 514 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CCDC6Q16204 474 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 MUM1Q2TAK8 710 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 NBPF20Q3BBV1 942 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 OR6B2Q6IFH4 312 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 TRMT10BQ6PF06 316 aaKnown RBP12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ZCCHC23Q6ZST2 131 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 VPS52Q8N1B4 723 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 SHKBP1Q8TBC3 707 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 CCDC110Q8TBZ0 833 aa12.81□□□□□ -0.36
VPS33B-201ENST00000333371 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms