RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 TRABD2AQ86V40 505 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 PLD5Q8N7P1 536 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 PYROXD1Q8WU10 500 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 SAMD15Q9P1V8 674 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 XPO7Q9UIA9 1087 aaKnown RBP18.14■□□□□ 0.49
DDX28-201ENST00000332395 IPPQ9Y573 584 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 CLUHO75153 1309 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 E7ESA3 106 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 H0YHG0 523 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 MDM4O15151 490 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 MAP2K2P36507 400 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 TAF6P49848 677 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 CA9Q16790 459 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 ANKRD20A8PQ5CZ79 823 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 PQLC3Q8N755 202 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 APPL2Q8NEU8 664 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 CLEC4CQ8WTT0 213 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 TSPAN18Q96SJ8 248 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 KATNAL1Q9BW62 490 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 OSBPL7Q9BZF2 842 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 SNX25Q9H3E2 840 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 PPCSQ9HAB8 311 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 UBN1Q9NPG3 1134 aa18.14■□□□□ 0.49
DDX28-201ENST00000332395 H7C0C1 242 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 APOL1O14791 398 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 TFE3P19532 575 aaPredicted RBP18.13■□□□□ 0.49
DDX28-201ENST00000332395 TGM2P21980 687 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 ATP5OP48047 213 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 ARHGEF18Q6ZSZ5 1173 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 SLC26A9Q7LBE3 791 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 ANKS4BQ8N8V4 417 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 ATP11CQ8NB49 1132 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 GDAP1Q8TB36 358 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 CKAP2Q8WWK9 683 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 ELAC2Q9BQ52 826 aaKnown RBP18.13■□□□□ 0.49
DDX28-201ENST00000332395 WDR83Q9BRX9 315 aaKnown RBP18.13■□□□□ 0.49
DDX28-201ENST00000332395 CXorf56Q9H5V9 222 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 NKIRAS1Q9NYS0 192 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 ZMYND8Q9ULU4 1186 aaPredicted RBP18.13■□□□□ 0.49
DDX28-201ENST00000332395 Q9Y3F1 56 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.13■□□□□ 0.49
DDX28-201ENST00000332395 GOLGA6L7A0A1B0GV03 622 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 DCAF8L1A6NGE4 600 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 TCP11X1B4DZS4 312 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 PHBP35232 272 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 PTPN9P43378 593 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 FSCN1Q16658 493 aaKnown RBP18.13■□□□□ 0.49
DDX28-201ENST00000332395 SV2CQ496J9 727 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 VSIG1Q86XK7 387 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 PDIK1LQ8N165 341 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 ARRDC4Q8NCT1 418 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 SMG8Q8ND04 991 aaKnown RBP18.13■□□□□ 0.49
DDX28-201ENST00000332395 PCDH19Q8TAB3 1148 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 SLC2A14Q8TDB8 520 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 ZNF670Q9BS34 389 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 SLC24A2Q9UI40 661 aa18.13■□□□□ 0.49
DDX28-201ENST00000332395 LCP1P13796 627 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 SSTR1P30872 391 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 STX2P32856 288 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 RGS2P41220 211 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 RPL34P49207 117 aaKnown RBP18.12■□□□□ 0.49
DDX28-201ENST00000332395 BCAR1P56945 870 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 RNASELQ05823 741 aaKnown RBP18.12■□□□□ 0.49
DDX28-201ENST00000332395 ITIH4Q14624 930 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 RASA2Q15283 850 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 EFHC2Q5JST6 749 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 SLC9A4Q6AI14 798 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 PPP1R21Q6ZMI0 780 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 LIMS2Q7Z4I7 341 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 RPAINQ86UA6 219 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 RASAL3Q86YV0 1011 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 ADGRF2Q8IZF7 708 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 NME8Q8N427 588 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 FBXO36Q8NEA4 188 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 C11orf84Q9BUA3 381 aaPredicted RBP18.12■□□□□ 0.49
DDX28-201ENST00000332395 USP29Q9HBJ7 922 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 RABGEF1Q9UJ41 708 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 HEY1Q9Y5J3 304 aa18.12■□□□□ 0.49
DDX28-201ENST00000332395 FAM47DPA6NHR8 397 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 GNAT1P11488 350 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 KRT15P19012 456 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 HOXC8P31273 242 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 SCNN1AP37088 669 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 PURAQ00577 322 aaKnown RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 SF3A3Q12874 501 aaKnown RBP eCLIP18.11■□□□□ 0.49
DDX28-201ENST00000332395 MTM1Q13496 603 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 PKN2Q16513 984 aaKnown RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 BBS9Q3SYG4 887 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 PPP6R3Q5H9R7 873 aaPredicted RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 TWF2Q6IBS0 349 aaKnown RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 MRRFQ96E11 262 aaKnown RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 CYLDQ9NQC7 956 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 PSMC3IPQ9P2W1 217 aaPredicted RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 MANSC4A6NHS7 340 aaPredicted RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 HUS1O60921 280 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 ZNF157P51786 506 aaPredicted RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 GEMIN4P57678 1058 aaKnown RBP18.11■□□□□ 0.49
DDX28-201ENST00000332395 LILRA4P59901 499 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 C17orf99Q6UX52 265 aa18.11■□□□□ 0.49
DDX28-201ENST00000332395 C3orf62Q6ZUJ4 267 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms