RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 NR2E1Q9Y466 385 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 LRP5O75197 1615 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SLX4Q8IY92 1834 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PRRG1O14668 218 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PQBP1O60828 265 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PMPCBO75439 489 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 F9P00740 461 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 KRT4P19013 534 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 MRPS6P82932 125 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SP3Q02447 781 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 ARHGAP1Q07960 439 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 LRRC6Q86X45 466 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 CPNE8Q86YQ8 564 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 DDX27Q96GQ7 796 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 EIF2AQ9BY44 585 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PPP1R12CQ9BZL4 782 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 YY1AP1Q9H869 796 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PFDN4Q9NQP4 134 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 TRIM49D1C9J1S8 452 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 KCNK1O00180 336 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 DNALI1O14645 258 aaPredicted RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 TSPAN1O60635 241 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 BAG2O95816 211 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 YBX3P16989 372 aaKnown RBP eCLIP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PTPN1P18031 435 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 CRYBB1P53674 252 aaPredicted RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 BHMTQ93088 406 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SGSM3Q96HU1 749 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PWWP2AQ96N64 755 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 MRPL45Q9BRJ2 306 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 B3GNT5Q9BYG0 378 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PIH1D1Q9NWS0 290 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 PAPPAQ13219 1627 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SMAPO00193 183 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 DDX3YO15523 660 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 USP17L7P0C7H9 530 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SSTR1P30872 391 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 ETFBP38117 255 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 GEMIN4P57678 1058 aaKnown RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 IFI35P80217 286 aaPredicted RBP9.88□□□□□ -0.83
SS18L1-201ENST00000331758 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 DNAJC3Q13217 504 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 CCL14Q16627 93 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SLC10A6Q3KNW5 377 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 SPATA21Q7Z572 469 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 UNC93AQ86WB7 457 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 TFAP2BQ92481 460 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 ATP6V1E2Q96A05 226 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 STAMBPL1Q96FJ0 436 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 COLEC11Q9BWP8 271 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 FZD8Q9H461 694 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 TXLNGQ9NUQ3 528 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 MID2Q9UJV3 735 aa9.88□□□□□ -0.83
SS18L1-201ENST00000331758 DDX60Q8IY21 1712 aaKnown RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 SMIM28A0A1B0GU29 152 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 SMIM35A0A1B0GVV1 85 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 TMEM191CA6NGB0 347 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 EIF4E1BA6NMX2 242 aaKnown RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 CLDN5O00501 218 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 DCTN3O75935 186 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 VNN1O95497 513 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 FAM107AO95990 144 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 JCHAINP01591 159 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 SNRPAP09012 282 aaKnown RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 ATP4AP20648 1035 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 KPNA2P52292 529 aaKnown RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 ARFIP2P53365 341 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 MAP3K10Q02779 954 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 LVRNQ6Q4G3 990 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 NPNTQ6UXI9 565 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 NDUFAF2Q8N183 169 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 SLC25A41Q8N5S1 370 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 GBP7Q8N8V2 638 aaPredicted RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 SH3TC2Q8TF17 1288 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 LRRN4Q8WUT4 740 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 CELF6Q96J87 481 aaKnown RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 TBCBQ99426 244 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 HMX1Q9NP08 348 aaPredicted RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 UBP1Q9NZI7 540 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 MARCOQ9UEW3 520 aaPredicted RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 RPS6KL1Q9Y6S9 549 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 MYH10P35580 1976 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 TULP2O00295 520 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 FSCN2O14926 492 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 IRF1P10914 325 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 IL31Q6EBC2 164 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 PDCD7Q8N8D1 485 aaKnown RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 B3GALNT2Q8NCR0 500 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 FBXO32Q969P5 355 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 SEC16BQ96JE7 1060 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 RPRD1AQ96P16 312 aaPredicted RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 FRMD8P1Q9BZ68 369 aaPredicted RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 ELOVL4Q9GZR5 314 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 CATSPERBQ9H7T0 1116 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 UBN1Q9NPG3 1134 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 PCYOX1Q9UHG3 505 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 TRIM17Q9Y577 477 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 MEFVO15553 781 aaPredicted RBP9.87□□□□□ -0.83
SS18L1-201ENST00000331758 FBXO21O94952 628 aa9.87□□□□□ -0.83
SS18L1-201ENST00000331758 RPLP2P05387 115 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms