RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
BEST3-203ENST00000331471 WNT6Q9Y6F9 365 aa9.42□□□□□ -0.9
BEST3-203ENST00000331471 PTPRJQ12913 1337 aa9.42□□□□□ -0.9
BEST3-203ENST00000331471 DENND4CQ5VZ89 1909 aa9.42□□□□□ -0.9
BEST3-203ENST00000331471 CCDC163A0A0D9SF12 145 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 C2orf78A6NCI8 922 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 BIN1O00499 593 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 GABRDO14764 452 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 GDF9O60383 454 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 ATP2C2O75185 946 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 CLSTN1O94985 981 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 F12P00748 615 aaPredicted RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 PDGFRBP09619 1106 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 DLATP10515 647 aaKnown RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 HDCP19113 662 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 TNNI1P19237 187 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 BDNFP23560 247 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 LMO2P25791 158 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 USP4Q13107 963 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 PNOCQ13519 176 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 MORC3Q14149 939 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 MAPRE1Q15691 268 aaKnown RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 CCDC6Q16204 474 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 FAM171BQ6P995 826 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 VSTM1Q6UX27 236 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 TMC6Q7Z403 805 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 KBTBD6Q86V97 674 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 WDR49Q8IV35 697 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 VSTM4Q8IW00 320 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 CAMKK1Q8N5S9 505 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 GLIS3Q8NEA6 775 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 SH3RF2Q8TEC5 729 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 KBTBD7Q8WVZ9 684 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 ERCC4Q92889 916 aaPredicted RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 LOXL4Q96JB6 756 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 FNBP1Q96RU3 617 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 SLC22A12Q96S37 553 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 SNX25Q9H3E2 840 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 L2HGDHQ9H9P8 463 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 FBRSL1Q9HCM7 1045 aaKnown RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 EHD2Q9NZN4 543 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 EIF3DO15371 548 aaKnown RBP eCLIP9.41□□□□□ -0.9
BEST3-203ENST00000331471 AKAP3O75969 853 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 EPN2O95208 641 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 NFATC1O95644 943 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 ADRB1P08588 477 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 ZNF18P17022 549 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 WARSP23381 471 aaKnown RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 UBASH3AP57075 661 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 TNNC1P63316 161 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 ARID5BQ14865 1188 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 SF3A2Q15428 464 aaKnown RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 EML3Q32P44 896 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 MDH1BQ5I0G3 518 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 E4F1Q66K89 784 aaPredicted RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 NAIF1Q69YI7 327 aaPredicted RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 DENND5BQ6ZUT9 1274 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 HS2ST1Q7LGA3 356 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 TRAPPC11Q7Z392 1133 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 OR6B3Q8NGW1 331 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 CCDC26Q8TAB7 109 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 DDX1Q92499 740 aaKnown RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 SMARCE1Q969G3 411 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 ACDQ96AP0 544 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 SPATA17Q96L03 361 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 TRIM9Q9C026 710 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 CUEDC2Q9H467 287 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 CRTAC1Q9NQ79 661 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 POLR3BQ9NW08 1133 aaPredicted RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 TRPM5Q9NZQ8 1165 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 GCNT4Q9P109 453 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 CGNQ9P2M7 1197 aaKnown RBP9.41□□□□□ -0.9
BEST3-203ENST00000331471 MAN1B1Q9UKM7 699 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 ARHGAP26Q9UNA1 814 aa9.41□□□□□ -0.9
BEST3-203ENST00000331471 GOLGA6L9A6NEM1 432 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 CLIC2O15247 247 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 APBB3O95704 486 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 ABL1P00519 1130 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 SERPINC1P01008 464 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 GNL1P36915 607 aaPredicted RBP9.4□□□□□ -0.91
BEST3-203ENST00000331471 CYP2J2P51589 502 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 SEC13P55735 322 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 IFRD2Q12894 506 aaPredicted RBP9.4□□□□□ -0.91
BEST3-203ENST00000331471 TRPC3Q13507 836 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 DMC1Q14565 340 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 ELF2Q15723 593 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 SNRNP35Q16560 246 aaKnown RBP9.4□□□□□ -0.91
BEST3-203ENST00000331471 PTPRNQ16849 979 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 MSS51Q4VC12 460 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 FAM26FQ5R3K3 315 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 SYT13Q7L8C5 426 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 NELFCDQ8IXH7 590 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 IQUBQ8NA54 791 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 MYCBPAPQ8TBZ2 947 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 CCDC127Q96BQ5 260 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 PCED1BQ96HM7 432 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 CEP295NLQ96MC4 621 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 CGRRF1Q99675 332 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 MRPL45Q9BRJ2 306 aaKnown RBP9.4□□□□□ -0.91
BEST3-203ENST00000331471 AGPAT3Q9NRZ7 376 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms