RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 NFIBO00712 420 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 VILLO15195 856 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 DESP17661 470 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 CDKN2BP42772 138 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 PSMC5P62195 406 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 ZNF200P98182 395 aaPredicted RBP18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 CDK18Q07002 472 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 ZNF252P-AS1Q0IIN9 211 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 CCNIQ14094 377 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 TEX44Q53QW1 395 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 LRRC38Q5VT99 294 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 TXNRD3NBQ6F5E7 133 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 FBXL19Q6PCT2 694 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 MIER3Q7Z3K6 550 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 ARPINQ7Z6K5 226 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 PDIK1LQ8N165 341 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 ZNF395Q9H8N7 513 aaPredicted RBP18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 PARVAQ9NVD7 372 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 EXOC7Q9UPT5 735 aa18.83■□□□□ 0.61
CLSTN3-202ENST00000331148 CCDC195A0A1B0GUA6 201 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 TCRBV9S1A1TA0A576 114 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 SERPINA6P08185 405 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 KITP10721 976 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 TPP2P29144 1249 aaPredicted RBP18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 C1QBPQ07021 282 aaKnown RBP18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 KBTBD12Q3ZCT8 623 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 ATG16L1Q676U5 607 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 OLFML2BQ68BL8 750 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 B3GNT6Q6ZMB0 384 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 IGDCC3Q8IVU1 814 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 ABRAQ8N0Z2 381 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 SLC26A7Q8TE54 656 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 E2F7Q96AV8 911 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 SH2D3AQ9BRG2 576 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 SMYD3Q9H7B4 428 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 MAP3K20Q9NYL2 800 aaKnown RBP18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 ZNF510Q9Y2H8 683 aa18.83■□□□□ 0.6
CLSTN3-202ENST00000331148 TXNDC9O14530 226 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 CCNT2O60583 730 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 ATP5BP06576 529 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 C6orf222P0C671 652 aaPredicted RBP18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 RPL22P35268 128 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 IREB2P48200 963 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 SLC25A3Q00325 362 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 GHRHRQ02643 423 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 NCOA4Q13772 614 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 RBM44Q6ZP01 1051 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 CATSPERGQ6ZRH7 1159 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 USP37Q86T82 979 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 SAMD3Q8N6K7 520 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 HOMER2Q9NSB8 354 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 XPO7Q9UIA9 1087 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 TBX20Q9UMR3 447 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 HBS1LQ9Y450 684 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 PARP14Q460N5 1801 aa18.82■□□□□ 0.6
CLSTN3-202ENST00000331148 BTBD19C9JJ37 291 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 P4HBP07237 508 aaKnown RBP18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 AOC1P19801 751 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 CHI3L2Q15782 390 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 SH3D19Q5HYK7 790 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 FBXL18Q96ME1 805 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 RILPQ96NA2 401 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 SAE1Q9UBE0 346 aaPredicted RBP18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 ADAMTS5Q9UNA0 930 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 A0A0J9YVX5 310 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 TMEM191CA6NGB0 347 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 F8VP50 259 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 TMEM191BP0C7N4 346 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 ELK3P41970 407 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 TBL3Q12788 808 aaKnown RBP18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 TRIP10Q15642 601 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 KLC3Q6P597 504 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 CRLF3Q8IUI8 442 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 MAP4K3Q8IVH8 894 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 JADE3Q92613 823 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 WNK4Q96J92 1243 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 RIT2Q99578 217 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 KIFC3Q9BVG8 833 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 USP29Q9HBJ7 922 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 SIRPGQ9P1W8 387 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 PLLPQ9Y342 182 aa18.81■□□□□ 0.6
CLSTN3-202ENST00000331148 TRIM49D1C9J1S8 452 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 RPL5P46777 297 aaKnown RBP18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 DYNLT1P63172 113 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 OTUD4Q01804 1114 aaKnown RBP18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 CDCA5Q96FF9 252 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 BTBD9Q96Q07 612 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 HOXC10Q9NYD6 342 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 SSX2IPQ9Y2D8 614 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 TMEM150BA6NC51 233 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 KBTBD13C9JR72 458 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 CSDE1O75534 798 aaKnown RBP18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 STK10O94804 968 aaKnown RBP18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 ACO1P21399 889 aaKnown RBP18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 GNA15P30679 374 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 OAZ1P54368 228 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 FOLH1Q04609 750 aa18.8■□□□□ 0.6
CLSTN3-202ENST00000331148 SLC39A4Q6P5W5 647 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms