RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ARIH2O95376 493 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 HMGCRP04035 888 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 GPD1P21695 349 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 BGNP21810 368 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 CDC25CP30307 473 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 PPIL2Q13356 520 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 UBA3Q8TBC4 463 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 TRAF3IP1Q8TDR0 691 aaPredicted RBP16■□□□□ 0.15
BRCC3-201ENST00000330045 TRAPPC12Q8WVT3 735 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 NSL1Q96IY1 281 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 HEXIM2Q96MH2 286 aaKnown RBP16■□□□□ 0.15
BRCC3-201ENST00000330045 BTBD10Q9BSF8 475 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 CNPY3Q9BT09 278 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 TMEM120AQ9BXJ8 343 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 CADM1Q9BY67 442 aaKnown RBP16■□□□□ 0.15
BRCC3-201ENST00000330045 RAB6BQ9NRW1 208 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 ARL8BQ9NVJ2 186 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 TNFSF13BQ9Y275 285 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 H0Y3Z8 333 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 DNAJC6O75061 913 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 LGR5O75473 907 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 LUC7L3O95232 432 aaKnown RBP15.99■□□□□ 0.15
BRCC3-201ENST00000330045 VDRP11473 427 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 SERPINB3P29508 390 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 CDK16Q00536 496 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 ZBTB16Q05516 673 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 RAB6CQ53S08 254 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 C1orf228Q6PIY5 440 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 CYP4V2Q6ZWL3 525 aaPredicted RBP15.99■□□□□ 0.15
BRCC3-201ENST00000330045 DPH6Q7L8W6 267 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 PLPPR4Q7Z2D5 763 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 PRPF39Q86UA1 669 aaKnown RBP15.99■□□□□ 0.15
BRCC3-201ENST00000330045 SLC26A11Q86WA9 606 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 RXFP2Q8WXD0 754 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 PTCD3Q96EY7 689 aaKnown RBP15.99■□□□□ 0.15
BRCC3-201ENST00000330045 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 MINDY3Q9H8M7 445 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 PNPLA8Q9NP80 782 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 PAK5Q9P286 719 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 GPR25O00155 361 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 CXCL11O14625 94 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 PRPSAP2O60256 369 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 LMNAP02545 664 aaKnown RBP15.99■□□□□ 0.15
BRCC3-201ENST00000330045 DLDP09622 509 aaKnown RBP15.99■□□□□ 0.15
BRCC3-201ENST00000330045 PDGFRAP16234 1089 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 C15orf59Q2T9L4 293 aaPredicted RBP15.99■□□□□ 0.15
BRCC3-201ENST00000330045 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 LDLRAD1Q5T700 205 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 TTC39BQ5VTQ0 682 aaPredicted RBP15.99■□□□□ 0.15
BRCC3-201ENST00000330045 JADE1Q6IE81 842 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 C4orf50Q6ZRC1 276 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 SKA1Q96BD8 255 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 CFAP36Q96G28 342 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 RNF157Q96PX1 679 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 DCLRE1BQ9H816 532 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 CYP3A43Q9HB55 503 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 USP29Q9HBJ7 922 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 CNTN3Q9P232 1028 aa15.99■□□□□ 0.15
BRCC3-201ENST00000330045 C2CD4BA6NLJ0 364 aa15.98■□□□□ 0.15
BRCC3-201ENST00000330045 MBTD1Q05BQ5 628 aa15.98■□□□□ 0.15
BRCC3-201ENST00000330045 CDO1Q16878 200 aa15.98■□□□□ 0.15
BRCC3-201ENST00000330045 OR6B2Q6IFH4 312 aa15.98■□□□□ 0.15
BRCC3-201ENST00000330045 TRNP1Q6NT89 227 aa15.98■□□□□ 0.15
BRCC3-201ENST00000330045 EFCAB12Q6NXP0 572 aa15.98■□□□□ 0.15
BRCC3-201ENST00000330045 CTAGE3PQ8IX95 158 aa15.98■□□□□ 0.15
BRCC3-201ENST00000330045 IQCGQ9H095 443 aaKnown RBP15.98■□□□□ 0.15
BRCC3-201ENST00000330045 FBXO6Q9NRD1 293 aaPredicted RBP15.98■□□□□ 0.15
BRCC3-201ENST00000330045 PIK3R2O00459 728 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 COPEO14579 308 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 KCNN4O15554 427 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 FAM155BO75949 473 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 IQCF3P0C7M6 154 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 STAG3L1P0CL83 205 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 PAX7P23759 505 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 ATICP31939 592 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 SERPINB4P48594 390 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 CLCN3P51790 818 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 YWHAZP63104 245 aaKnown RBP15.97■□□□□ 0.15
BRCC3-201ENST00000330045 CBLBQ13191 982 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 KRT81Q14533 505 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 RFWD3Q6PCD5 774 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 MAP7D3Q8IWC1 876 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.97■□□□□ 0.15
BRCC3-201ENST00000330045 PPM1NQ8N819 430 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 FGD4Q96M96 766 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 FRMD8Q9BZ67 464 aaPredicted RBP15.97■□□□□ 0.15
BRCC3-201ENST00000330045 TRIM6Q9C030 488 aaPredicted RBP15.97■□□□□ 0.15
BRCC3-201ENST00000330045 TRIM49D1C9J1S8 452 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 LIN7AO14910 233 aaPredicted RBP15.97■□□□□ 0.15
BRCC3-201ENST00000330045 GYG2O15488 501 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 GSC2O15499 205 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 IL1BP01584 269 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 P4HA1P13674 534 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 PTDSS1P48651 473 aaKnown RBP15.97■□□□□ 0.15
BRCC3-201ENST00000330045 BLMHQ13867 455 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 CELF3Q5SZQ8 465 aaKnown RBP15.97■□□□□ 0.15
BRCC3-201ENST00000330045 PLD5Q8N7P1 536 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 CXorf38Q8TB03 319 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 ZBTB10Q96DT7 871 aa15.97■□□□□ 0.15
BRCC3-201ENST00000330045 SRPK1Q96SB4 655 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms