RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TMC8Q8IU68 726 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 LRRC57Q8N9N7 239 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 TMEM35BQ8NCS4 154 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 MSANTD4Q8NCY6 345 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 FGF14Q92915 247 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 ACSF2Q96CM8 615 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 MCRS1Q96EZ8 462 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 LHX5Q9H2C1 402 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 TMEM30AQ9NV96 361 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 HMGXB4Q9UGU5 601 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 MYH10P35580 1976 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 THAP12O43422 761 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 BUB1O43683 1085 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 NARSO43776 548 aaKnown RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 ATP1A1P05023 1023 aaKnown RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 TUBBP07437 444 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 CDH5P33151 784 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 TSPY1Q01534 308 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 MTMR3Q13615 1198 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 GAREM2Q75VX8 874 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 UNC93AQ86WB7 457 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 DCP1BQ8IZD4 617 aaKnown RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 PLCD3Q8N3E9 789 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 OR6B3Q8NGW1 331 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 EDAQ92838 391 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 PBKQ96KB5 322 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 ZNF512Q96ME7 567 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 SYT15Q9BQS2 421 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 MIS12Q9H081 205 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 THAP2Q9H0W7 228 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 MRPL47Q9HD33 250 aaKnown RBP17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 CDH7Q9ULB5 785 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
PDLIM1-201ENST00000329399 CTAGE15A4D2H0 777 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 GRID2IPA4D2P6 1211 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 TMCO5BA8MYB1 307 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 ANHXE9PGG2 379 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 CILPO75339 1184 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 CALB1P05937 261 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 CTAGE8P0CG41 777 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 VDRP11473 427 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 MYL4P12829 197 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 PAFAH1B1P43034 410 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 ALDH1A3P47895 512 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 CACNA2D1P54289 1103 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 EPHA5P54756 1037 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 RPS6KA1Q15418 735 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 STXBP5Q5T5C0 1151 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 CTAGE6Q86UF2 777 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 CTAGE4Q8IX94 777 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 MCOLN2Q8IZK6 566 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 SHKBP1Q8TBC3 707 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 UBXN4Q92575 508 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 TMEM176AQ96HP8 235 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 SELENOOQ9BVL4 669 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 AMFRQ9UKV5 643 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 CDH9Q9ULB4 789 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 SCINQ9Y6U3 715 aa17.3■□□□□ 0.36
PDLIM1-201ENST00000329399 MIF4GDA9UHW6 222 aaKnown RBP17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 CLDN5O00501 218 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 ALADP13716 330 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 HMGA1P17096 107 aaKnown RBP17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 PTPN1P18031 435 aaKnown RBP17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 ABCB4P21439 1286 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 PCSK1P29120 753 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 EPHB3P54753 998 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 HTR4Q13639 388 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 MDH1BQ5I0G3 518 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 ZNF572Q7Z3I7 529 aaPredicted RBP17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 PEX26Q7Z412 305 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 DAAM2Q86T65 1068 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 SLC44A3Q8N4M1 653 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 SPATA18Q8TC71 538 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 SPPL2BQ8TCT7 592 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 GOLGA1Q92805 767 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 PSMG2Q969U7 264 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 MYLPFQ96A32 169 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 PCED1BQ96HM7 432 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 TWNKQ96RR1 684 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 OSBPL9Q96SU4 736 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 CARD6Q9BX69 1037 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 TLR10Q9BXR5 811 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 PLA2G2FQ9BZM2 168 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 SNX25Q9H3E2 840 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 IL21Q9HBE4 155 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 ABCB6Q9NP58 842 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 TAS2R14Q9NYV8 317 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 CTTNBP2NLQ9P2B4 639 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 HSFX1Q9UBD0 423 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 STRIP2Q9ULQ0 834 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 NUMBLQ9Y6R0 609 aa17.29■□□□□ 0.36
PDLIM1-201ENST00000329399 A0A1W2PRU2 124 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 ENC1O14682 589 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 CD58P19256 250 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 BDNFP23560 247 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 TUFMP49411 452 aaKnown RBP17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 SNX16P57768 344 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 NOMO3P69849 1222 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms