RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 DUSP4Q13115 394 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 PPP2R5EQ16537 467 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 TMEM110Q86TL2 294 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 SCN4BQ8IWT1 228 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 SPPL2BQ8TCT7 592 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 IPO4Q8TEX9 1081 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 C2orf15Q8WU43 125 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 C18orf8Q96DM3 657 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 KRT12Q99456 494 aa19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 AFF4Q9UHB7 1163 aaKnown RBP19.68■□□□□ 0.74
EXOSC3-201ENST00000327304 C2orf71A6NGG8 1288 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 EPOPA6NHQ4 379 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 SEC31AO94979 1220 aaKnown RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 FGGP02679 453 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 LCP1P13796 627 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 TNFRSF8P28908 595 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 GSCP56915 257 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 RWDD2BP57060 319 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 SMC1AQ14683 1233 aaKnown RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 SDHAF4Q5VUM1 108 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 VSTM1Q6UX27 236 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 CCNI2Q6ZMN8 369 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 XYLT1Q86Y38 959 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 MRPL43Q8N983 215 aaKnown RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 ZNF461Q8TAF7 563 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 TIFAQ96CG3 184 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 HSFY1Q96LI6 401 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 DMGDHQ9UI17 866 aaKnown RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 IRAK3Q9Y616 596 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 GJB6O95452 261 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 SEC24AO95486 1093 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 HAPLN1P10915 354 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 SMAD3P84022 425 aaKnown RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 ADIGQ0VDE8 80 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 DDR2Q16832 855 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 SEL1L2Q5TEA6 688 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 TPGS2Q68CL5 300 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 FAM183BPQ6ZVS7 135 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 KCTD13Q8WZ19 329 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 KLHL5Q96PQ7 755 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 SEPT5Q99719 369 aaPredicted RBP19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 SLITRK6Q9H5Y7 841 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 CYLDQ9NQC7 956 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 IP6K2Q9UHH9 426 aa19.67■□□□□ 0.74
EXOSC3-201ENST00000327304 PATJQ8NI35 1801 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 MYO7AQ13402 2215 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 GOLGA8SH3BPF8 625 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 PAPSS1O43252 624 aaPredicted RBP19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 MARCKSL1P49006 195 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 MGAT5BQ3V5L5 792 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 DNAJC24Q6P3W2 148 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 C3orf20Q8ND61 904 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 STKLD1Q8NE28 680 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 MICAL1Q8TDZ2 1067 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 GDPD5Q8WTR4 605 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 HDAC7Q8WUI4 952 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 PIWIL1Q96J94 861 aaKnown RBP19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 UBXN6Q9BZV1 441 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 TRIM7Q9C029 511 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 MIS12Q9H081 205 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 NGRNQ9NPE2 291 aaKnown RBP19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 WDR35Q9P2L0 1181 aa19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.66■□□□□ 0.74
EXOSC3-201ENST00000327304 GOLGA6L10A0A0M3HER8 536 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 TMEM191CA6NGB0 347 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 ATF2P15336 505 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 ACADSBP45954 432 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 ZNF211Q13398 564 aaPredicted RBP19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 PPP1R15BQ5SWA1 713 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 OR6B2Q6IFH4 312 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 SCUBE3Q8IX30 993 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 CLEC4CQ8WTT0 213 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 C8orf48Q96LL4 319 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 AP1M1Q9BXS5 423 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 LRRC4Q9HBW1 653 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 FAM53CQ9NYF3 392 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 TRANK1O15050 2925 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 TRIM66O15016 1216 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 TKTL1P51854 596 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 ZNF268Q14587 947 aaPredicted RBP19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 RAB41Q5JT25 222 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 KLHL7Q8IXQ5 586 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 IFT20Q8IY31 132 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 GPR152Q8TDT2 470 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 MCRS1Q96EZ8 462 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 EMILIN2Q9BXX0 1053 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 FUT8Q9BYC5 575 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 PNPLA8Q9NP80 782 aa19.65■□□□□ 0.74
EXOSC3-201ENST00000327304 TNFRSF10BO14763 440 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 SART1O43290 800 aaKnown RBP19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 PSTPIP1O43586 416 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 ADH1AP07327 375 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 SPATA31D3P0C874 917 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 PYGMP11217 842 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 SLC7A5Q01650 507 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 OLFML1Q6UWY5 402 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 SPATA31D4Q6ZUB0 917 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 HDXQ7Z353 690 aa19.64■□□□□ 0.73
EXOSC3-201ENST00000327304 CPNE8Q86YQ8 564 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms