RNA–Protein interactions for RNA: ENST00000325752.7

TUBD1-201, Transcript of tubulin delta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TUBD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-201ENST00000325752 LMO2P25791 158 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 STIP1P31948 543 aaKnown RBP12.11□□□□□ -0.47
TUBD1-201ENST00000325752 GRM5P41594 1212 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 NCALDP61601 193 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 DGKDQ16760 1214 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 KBTBD12Q3ZCT8 623 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 GPR142Q7Z601 462 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 FAM228AQ86W67 206 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 MAP7D3Q8IWC1 876 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 PCDH19Q8TAB3 1148 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 CCDC110Q8TBZ0 833 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 FRMD8P1Q9BZ68 369 aaPredicted RBP12.11□□□□□ -0.47
TUBD1-201ENST00000325752 ACSS3Q9H6R3 686 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 SMG5Q9UPR3 1016 aaKnown RBP12.11□□□□□ -0.47
TUBD1-201ENST00000325752 IGF2BP3O00425 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
TUBD1-201ENST00000325752 FAM155BO75949 473 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 ZBED1O96006 694 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 APRTP07741 180 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 GSTA1P08263 222 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 SLC6A3Q01959 620 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 ACVR2BQ13705 512 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 TFDP2Q14188 446 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 E2F5Q15329 346 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 SOWAHAQ2M3V2 549 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 LDLRAD1Q5T700 205 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 PQLC3Q8N755 202 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 TCP10LQ8TDR4 215 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 NDRG1Q92597 394 aaKnown RBP12.11□□□□□ -0.47
TUBD1-201ENST00000325752 KHSRPQ92945 711 aaKnown RBP eCLIP12.11□□□□□ -0.471e-7■■■■□ 24
TUBD1-201ENST00000325752 KLHL29Q96CT2 875 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 FAXDC2Q96IV6 333 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 MAML3Q96JK9 1138 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 TRIM56Q9BRZ2 755 aaKnown RBP12.11□□□□□ -0.47
TUBD1-201ENST00000325752 RXFP1Q9HBX9 757 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 SPON1Q9HCB6 807 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 PCDH18Q9HCL0 1135 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 SLC17A7Q9P2U7 560 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 ZMYND8Q9ULU4 1186 aaPredicted RBP12.11□□□□□ -0.47
TUBD1-201ENST00000325752 IKBKGQ9Y6K9 419 aa12.11□□□□□ -0.47
TUBD1-201ENST00000325752 SYNJ2BP-COX16A0A087WUM0 186 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 TCRBV9S1A1TA0A576 114 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 NDC80O14777 642 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 APOL1O14791 398 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 RECQL4O94761 1208 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 ENDOD1O94919 500 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
TUBD1-201ENST00000325752 HDAC4P56524 1084 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 OVGP1Q12889 678 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 KYAT1Q16773 422 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 KLHL38Q2WGJ6 581 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 DUSP28Q4G0W2 176 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 FAM47CQ5HY64 1035 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 SLC27A1Q6PCB7 646 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 PRPF39Q86UA1 669 aaKnown RBP12.1□□□□□ -0.47
TUBD1-201ENST00000325752 EGFL6Q8IUX8 553 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 CTAGE3PQ8IX95 158 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 AGGF1Q8N302 714 aaeCLIP12.1□□□□□ -0.474e-12■■■■□ 25.9
TUBD1-201ENST00000325752 ANKLE1Q8NAG6 615 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 SLC35F5Q8WV83 523 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 DCAKDQ8WVC6 231 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 BRI3BPQ8WY22 251 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 MS4A4AQ96JQ5 239 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 DHX35Q9H5Z1 703 aaKnown RBP12.1□□□□□ -0.47
TUBD1-201ENST00000325752 USP29Q9HBJ7 922 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 COX16Q9P0S2 106 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 SENP1Q9P0U3 644 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 E7ESA3 106 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 BNIP1Q12981 228 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 PTK7Q13308 1070 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 PDK4Q16654 411 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 GALNTL6Q49A17 601 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 BOLA3Q53S33 107 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 NPLOC4Q8TAT6 608 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 ZC3H15Q8WU90 426 aaKnown RBP12.1□□□□□ -0.47
TUBD1-201ENST00000325752 DNAJB3Q8WWF6 145 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 ERP27Q96DN0 273 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 SNX27Q96L92 541 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 TINF2Q9BSI4 451 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
TUBD1-201ENST00000325752 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 ADAMTS10Q9H324 1103 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 KIAA1257Q9ULG3 409 aa12.1□□□□□ -0.47
TUBD1-201ENST00000325752 PIN4Q9Y237 131 aaKnown RBP12.1□□□□□ -0.47
TUBD1-201ENST00000325752 A8MUI8 341 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 ZNF200P98182 395 aaPredicted RBP12.09□□□□□ -0.47
TUBD1-201ENST00000325752 GBE1Q04446 702 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 KCNJ11Q14654 390 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 PKDCCQ504Y2 493 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 ZNF410Q86VK4 478 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 BEST2Q8NFU1 509 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 TMEM40Q8WWA1 233 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 ZNF75CPQ92670 426 aaPredicted RBP12.09□□□□□ -0.47
TUBD1-201ENST00000325752 EMID1Q96A84 441 aaPredicted RBP12.09□□□□□ -0.47
TUBD1-201ENST00000325752 CYTH2Q99418 400 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 SYT17Q9BSW7 474 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 MYLK2Q9H1R3 596 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 DCTN4Q9UJW0 460 aa12.09□□□□□ -0.47
TUBD1-201ENST00000325752 COL1A2P08123 1366 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms