RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 FAM187BQ17R55 369 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 KBTBD12Q3ZCT8 623 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 CYP4V2Q6ZWL3 525 aaPredicted RBP20.69■□□□□ 0.9
SOX2-201ENST00000325404 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.69■□□□□ 0.9
SOX2-201ENST00000325404 PTPRN2Q92932 1015 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 LRRC39Q96DD0 335 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 NAF1Q96HR8 494 aaKnown RBP20.69■□□□□ 0.9
SOX2-201ENST00000325404 SERAC1Q96JX3 654 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 ADAM33Q9BZ11 813 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 MMADHCQ9H3L0 296 aaPredicted RBP20.69■□□□□ 0.9
SOX2-201ENST00000325404 KCNK13Q9HB14 408 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 USP29Q9HBJ7 922 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 GBA2Q9HCG7 927 aaPredicted RBP20.69■□□□□ 0.9
SOX2-201ENST00000325404 HEY2Q9UBP5 337 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 CCL15-CCL14A0A0B4J2E2 113 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 WDR91A4D1P6 747 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 C2CD4BA6NLJ0 364 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 PDHXO00330 501 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 C1QAP02745 245 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 KRT19P08727 400 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 DLDP09622 509 aaKnown RBP20.69■□□□□ 0.9
SOX2-201ENST00000325404 TGM2P21980 687 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 CCNA1P78396 465 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 MBTD1Q05BQ5 628 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 FAAP100Q0VG06 881 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 BLMHQ13867 455 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 TAF11Q15544 211 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 CCL15Q16663 113 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 C4orf50Q6ZRC1 276 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 GPRC5AQ8NFJ5 357 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 TEKT4Q8WW24 435 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 MS4A4AQ96JQ5 239 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 RNF157Q96PX1 679 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 PEBP4Q96S96 227 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 ASB7Q9H672 318 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 DENND2DQ9H6A0 471 aaPredicted RBP20.69■□□□□ 0.9
SOX2-201ENST00000325404 SLC45A1Q9Y2W3 748 aa20.69■□□□□ 0.9
SOX2-201ENST00000325404 ZNF487B1APH4 448 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 STAU1O95793 577 aaKnown RBP20.68■□□□□ 0.9
SOX2-201ENST00000325404 CDH6P55285 790 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 CDH8P55286 799 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 TAF5Q15542 800 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 KYAT1Q16773 422 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 LY6KQ17RY6 165 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 BOLA3Q53S33 107 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 CELF3Q5SZQ8 465 aaKnown RBP20.68■□□□□ 0.9
SOX2-201ENST00000325404 LGSNQ5TDP6 509 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 EEF1DP3Q658K8 133 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 LRRC71Q8N4P6 559 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 TWNKQ96RR1 684 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 DCTN4Q9UJW0 460 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 LRRC37A2A6NM11 1700 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 GOLGA8RI6L899 631 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 DPYSL4O14531 572 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 CXCL8P10145 99 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 MCF2P10911 925 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 PRKCHP24723 683 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 INCA1Q0VD86 236 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 FAM102AQ5T9C2 384 aaPredicted RBP20.68■□□□□ 0.9
SOX2-201ENST00000325404 LRRC6Q86X45 466 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 FAF2Q96CS3 445 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 SMYD3Q9H7B4 428 aa20.68■□□□□ 0.9
SOX2-201ENST00000325404 PRMT7Q9NVM4 692 aaPredicted RBP20.68■□□□□ 0.9
SOX2-201ENST00000325404 BCLAF3A2AJT9 711 aaKnown RBP20.67■□□□□ 0.9
SOX2-201ENST00000325404 BTBD19C9JJ37 291 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 INO80B-WBP1J3KQ70 363 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 M0QYV0 167 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 KRT37O76014 449 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 YWHAGP61981 247 aaKnown RBP eCLIP20.67■□□□□ 0.9
SOX2-201ENST00000325404 STILQ15468 1287 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 MCUQ8NE86 351 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 AFG1LQ8WV93 481 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 TBCBQ99426 244 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 MIPEPQ99797 713 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 CADM1Q9BY67 442 aaKnown RBP20.67■□□□□ 0.9
SOX2-201ENST00000325404 INO80BQ9C086 356 aaPredicted RBP20.67■□□□□ 0.9
SOX2-201ENST00000325404 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.67■□□□□ 0.9
SOX2-201ENST00000325404 PRPSAP2O60256 369 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 ARIH2O95376 493 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 ATP5BP06576 529 aaKnown RBP20.67■□□□□ 0.9
SOX2-201ENST00000325404 SNRPAP09012 282 aaKnown RBP20.67■□□□□ 0.9
SOX2-201ENST00000325404 CHRM1P11229 460 aaPredicted RBP20.67■□□□□ 0.9
SOX2-201ENST00000325404 SERPINB4P48594 390 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 LCLAT1Q6UWP7 414 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 CEP120Q8N960 986 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 RAB3IL1Q8TBN0 382 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 FAM111AQ96PZ2 611 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 KLF6Q99612 283 aaPredicted RBP20.67■□□□□ 0.9
SOX2-201ENST00000325404 TMEM120AQ9BXJ8 343 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 CORO1CQ9ULV4 474 aaPredicted RBP20.67■□□□□ 0.9
SOX2-201ENST00000325404 TTLL3Q9Y4R7 772 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 NUMBLQ9Y6R0 609 aa20.67■□□□□ 0.9
SOX2-201ENST00000325404 A0A0G2JND7 137 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 LACTBL1A8MY62 500 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 NFICP08651 508 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 PYGBP11216 843 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 CCNFP41002 786 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 OVGP1Q12889 678 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 C2orf69Q8N8R5 385 aa20.66■□□□□ 0.9
SOX2-201ENST00000325404 RXFP2Q8WXD0 754 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms