RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 NDST1P52848 882 aa9.27□□□□□ -0.93
CD28-201ENST00000324106 NCALDP61601 193 aa9.27□□□□□ -0.93
CD28-201ENST00000324106 CENPPQ6IPU0 288 aa9.27□□□□□ -0.93
CD28-201ENST00000324106 DENND5BQ6ZUT9 1274 aa9.27□□□□□ -0.93
CD28-201ENST00000324106 TRAPPC12Q8WVT3 735 aa9.27□□□□□ -0.93
CD28-201ENST00000324106 ING2Q9H160 280 aa9.27□□□□□ -0.93
CD28-201ENST00000324106 TRABDQ9H4I3 376 aa9.27□□□□□ -0.93
CD28-201ENST00000324106 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.27□□□□□ -0.93
CD28-201ENST00000324106 TIMM13Q9Y5L4 95 aaPredicted RBP9.27□□□□□ -0.93
CD28-201ENST00000324106 RNF103-CHMP3A0A140T963 221 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 OR6C75A6NL08 312 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 CSDE1O75534 798 aaKnown RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 SLITRK3O94933 977 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 RRM1P23921 792 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 MAGOHP61326 146 aaKnown RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 GRIK3Q13003 919 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ITGA9Q13797 1035 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 CLEC16AQ2KHT3 1053 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SLC39A12Q504Y0 691 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 EPC2Q52LR7 807 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 GJC2Q5T442 439 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 MFSD4BQ5TF39 518 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ANKMY2Q8IV38 441 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 MAP4K3Q8IVH8 894 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 RXFP2Q8WXD0 754 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ELAC2Q9BQ52 826 aaKnown RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 AGPAT5Q9NUQ2 364 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ZFP69BQ9UJL9 534 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 TSPAN16Q9UKR8 245 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 PSMD12O00232 456 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 KPNA3O00505 521 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 IL10P22301 178 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 MAPK1P28482 360 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 OR1E1P30953 314 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 CAPZA2P47755 286 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 PPP2R2AP63151 447 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 GRAMD1BQ3KR37 738 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 TFDP3Q5H9I0 405 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 BTNL9Q6UXG8 535 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 PGLYRP2Q96PD5 576 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SLC4A9Q96Q91 983 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 DNAJC7Q99615 494 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 ABCC13Q9NSE7 274 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 MARCH2Q9P0N8 246 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 MRPS17Q9Y2R5 130 aaKnown RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 CHD2O14647 1828 aaKnown RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 COL1A2P08123 1366 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ZNF839A8K0R7 811 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SYCE1LA8MT33 242 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 GLUD1P00367 558 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 AGTP01019 485 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SELPP16109 830 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 PON1P27169 355 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 CDC25CP30307 473 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SCNN1BP51168 640 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SCNN1GP51170 649 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 STX3Q13277 289 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 MAPK8IP2Q13387 824 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 TMCO4Q5TGY1 634 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ZFPM1Q8IX07 1006 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ABRAQ8N0Z2 381 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ZNF507Q8TCN5 953 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SGSM3Q96HU1 749 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ABHD8Q96I13 439 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 VPS50Q96JG6 964 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 MRPL46Q9H2W6 279 aaKnown RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 SEPT3Q9UH03 358 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 RPS6KL1Q9Y6S9 549 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ZSCAN9O15535 394 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 HOXB8P17481 243 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 ACAP1Q15027 740 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SNCBQ16143 134 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ATAT1Q5SQI0 421 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 ILDR2Q71H61 639 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 RASGRP2Q7LDG7 609 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SETD3Q86TU7 594 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 CERS5Q8N5B7 392 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 EIF2AQ9BY44 585 aaKnown RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 PRKD2Q9BZL6 878 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 PDGFDQ9GZP0 370 aaPredicted RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 TLE6Q9H808 572 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 RBM22Q9NW64 420 aaKnown RBP eCLIP9.26□□□□□ -0.93
CD28-201ENST00000324106 CDH9Q9ULB4 789 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 CHMP2BQ9UQN3 213 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 UBIAD1Q9Y5Z9 338 aa9.26□□□□□ -0.93
CD28-201ENST00000324106 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.26□□□□□ -0.93
CD28-201ENST00000324106 MOXD2PA6NHM9 499 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 SDR42E2A6NKP2 422 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 BTBD19C9JJ37 291 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 FAM86B1E9PN63 330 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 HNRNPRO43390 633 aaKnown RBP9.25□□□□□ -0.93
CD28-201ENST00000324106 JCHAINP01591 159 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 LTFP02788 710 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 FAM86B2P0C5J1 330 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 CTSEP14091 401 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 HDCP19113 662 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 MSH3P20585 1137 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 SERPINA4P29622 427 aa9.25□□□□□ -0.93
CD28-201ENST00000324106 LRRC74AQ0VAA2 488 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms