RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 FRMD8P1Q9BZ68 369 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-201ENST00000320755 SLC13A1Q9BZW2 595 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 MAF1Q9H063 256 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 PPCSQ9HAB8 311 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 PPME1Q9Y570 386 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 MAD1L1Q9Y6D9 718 aa18.14■□□□□ 0.49
COL9A1-201ENST00000320755 IQANK1A0A1B0GTG1 560 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 H0Y3Z8 333 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 LGALS2P05162 132 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 CYP2C8P10632 490 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 MCF2P10911 925 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 CCND1P24385 295 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 HES2Q9Y543 173 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 LTBP3Q9NS15 1303 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 TRIM49D1C9J1S8 452 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 PCK1P35558 622 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 GABRB2P47870 512 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 RBP5P82980 135 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 BMPR2Q13873 1038 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 NAA25Q14CX7 972 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 MAP7D3Q8IWC1 876 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 MRPL45Q9BRJ2 306 aaKnown RBP18.13■□□□□ 0.49
COL9A1-201ENST00000320755 DHRS4Q9BTZ2 278 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 TSSK1BQ9BXA7 367 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 YY1AP1Q9H869 796 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 CYP3A43Q9HB55 503 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 USP29Q9HBJ7 922 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 HEY2Q9UBP5 337 aa18.13■□□□□ 0.49
COL9A1-201ENST00000320755 ZC3H7BQ9UGR2 993 aaKnown RBP18.13■□□□□ 0.49
COL9A1-201ENST00000320755 A0A1B0GUA9 196 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 EIF4E1BA6NMX2 242 aaKnown RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 CXorf49A8MYA2 514 aaPredicted RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 UGT1A9O60656 530 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 TNFAIP2Q03169 654 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 IQCGQ9H095 443 aaKnown RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 UGT1A7Q9HAW7 530 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 UGT1A10Q9HAW8 530 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 UGT1A8Q9HAW9 530 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 NKX1-2Q9UD57 310 aaPredicted RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 C15orf41Q9Y2V0 281 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 TEX264Q9Y6I9 313 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 PFKMP08237 780 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 IL4RP24394 825 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 SDC4P31431 198 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 SLC26A2P50443 739 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 ARMCX2Q7L311 632 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 ERO1BQ86YB8 467 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 PCDH19Q8TAB3 1148 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 SLC7A6OSQ96CW6 309 aaPredicted RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 APOL6Q9BWW8 343 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 ASB7Q9H672 318 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 FBXO6Q9NRD1 293 aaPredicted RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 CENPFP49454 3210 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 APOL1O14791 398 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 PDGFRBP09619 1106 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 ALADP13716 330 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 ATICP31939 592 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 SKIV2L2P42285 1042 aaKnown RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 KCNJ11Q14654 390 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 KIZQ2M2Z5 673 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 ZNF276Q8N554 614 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 PRR11Q96HE9 360 aaPredicted RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 MECRQ9BV79 373 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 SNRNP25Q9BV90 132 aaKnown RBP18.12■□□□□ 0.49
COL9A1-201ENST00000320755 LRMDAQ9H2I8 198 aa18.12■□□□□ 0.49
COL9A1-201ENST00000320755 MYO18AQ92614 2054 aaKnown RBP18.11■□□□□ 0.49
COL9A1-201ENST00000320755 CCDC195A0A1B0GUA6 201 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 RASA2Q15283 850 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 LCLAT1Q6UWP7 414 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 CDHR3Q6ZTQ4 885 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 PQLC3Q8N755 202 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 OR6B3Q8NGW1 331 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 CLEC4CQ8WTT0 213 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 SLC44A1Q8WWI5 657 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 RSRC1Q96IZ7 334 aaKnown RBP18.11■□□□□ 0.49
COL9A1-201ENST00000320755 TRIM55Q9BYV6 548 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 FAM49AQ9H0Q0 323 aaPredicted RBP18.11■□□□□ 0.49
COL9A1-201ENST00000320755 DHX35Q9H5Z1 703 aaKnown RBP18.11■□□□□ 0.49
COL9A1-201ENST00000320755 EBF2Q9HAK2 575 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 PIH1D1Q9NWS0 290 aaKnown RBP18.11■□□□□ 0.49
COL9A1-201ENST00000320755 KANSL3Q9P2N6 904 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 ANK1P16157 1881 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 YWHAZP63104 245 aaKnown RBP18.11■□□□□ 0.49
COL9A1-201ENST00000320755 ACAP1Q15027 740 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 FAM47CQ5HY64 1035 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 TTC30AQ86WT1 665 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 FAM13CQ8NE31 585 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 PCDH18Q9HCL0 1135 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 TRIP11Q15643 1979 aa18.11■□□□□ 0.49
COL9A1-201ENST00000320755 DNAJC25-GNG10A0A024R161 153 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 COPEO14579 308 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 TM9SF1O15321 606 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 ATP5HO75947 161 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 IRX4P78413 519 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 ARHGAP1Q07960 439 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 CLNKQ7Z7G1 428 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 VPS11Q9H270 941 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 ADORA2BP29275 332 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 SERPINB3P29508 390 aa18.1■□□□□ 0.49
COL9A1-201ENST00000320755 ADCYAP1R1P41586 468 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms