RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 SCN4BQ8IWT1 228 aa32.76■■■□□ 2.83
NECTIN3-201ENST00000319792 RBM41Q96IZ5 413 aaKnown RBP32.76■■■□□ 2.83
NECTIN3-201ENST00000319792 RAD9AQ99638 391 aa32.76■■■□□ 2.83
NECTIN3-201ENST00000319792 LBHD1Q9BQE6 289 aaPredicted RBP32.76■■■□□ 2.83
NECTIN3-201ENST00000319792 MTIF3Q9H2K0 278 aaKnown RBP32.76■■■□□ 2.83
NECTIN3-201ENST00000319792 USP18Q9UMW8 372 aa32.76■■■□□ 2.83
NECTIN3-201ENST00000319792 CCDC188H7C350 402 aa32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 LTFP02788 710 aa32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 ATP11AP98196 1134 aa32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 ROR1Q01973 937 aa32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 SLC25A52Q3SY17 297 aa32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 ATP13A4Q4VNC1 1196 aa32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 CYP4V2Q6ZWL3 525 aaPredicted RBP32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 BNIPLQ7Z465 357 aa32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 ZNF638Q14966 1978 aaKnown RBP32.75■■■□□ 2.83
NECTIN3-201ENST00000319792 KRIT1O00522 736 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 ADAM12O43184 909 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 KRT1P04264 644 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 FYNP06241 537 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 ELF2Q15723 593 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 CDO1Q16878 200 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 STRADAQ7RTN6 431 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 PEBP4Q96S96 227 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 NPY6RQ99463 290 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 CLSTN3Q9BQT9 956 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 ADAM33Q9BZ11 813 aa32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 NGRNQ9NPE2 291 aaKnown RBP32.74■■■□□ 2.83
NECTIN3-201ENST00000319792 WDR27A2RRH5 827 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 FSCN2O14926 492 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 HAPLN1P10915 354 aaPredicted RBP32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 ATP2A2P16615 1042 aaKnown RBP32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 PTPN7P35236 360 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 HDAC4P56524 1084 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 COPS2P61201 443 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 RAB6CQ53S08 254 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 BEND5Q7L4P6 421 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 TTC9BQ8N6N2 239 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 SCAMP5Q8TAC9 235 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 TSC1Q92574 1164 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 SLITRK1Q96PX8 696 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 RAB6CQ9H0N0 254 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 STAP1Q9ULZ2 295 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 PLXNA4Q9HCM2 1894 aa32.73■■■□□ 2.83
NECTIN3-201ENST00000319792 DYNC1I1O14576 645 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 ENDOD1O94919 500 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 TFE3P19532 575 aaPredicted RBP32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 TBCBQ99426 244 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 TRIM62Q9BVG3 475 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 AP1M1Q9BXS5 423 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 CRISPLD1Q9H336 500 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 ZWILCHQ9H900 591 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 IL37Q9NZH6 218 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 PCSK1NQ9UHG2 260 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 PRPSAP2O60256 369 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 URODP06132 367 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 OR1D2P34982 312 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 DCAF6Q58WW2 860 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 OTUD1Q5VV17 481 aaPredicted RBP32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 NUP93Q8N1F7 819 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 GPR161Q8N6U8 529 aaKnown RBP32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 CMASQ8NFW8 434 aaPredicted RBP32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 TEKT4Q8WW24 435 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 SPATA17Q96L03 361 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 KLHL11Q9NVR0 708 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 RRN3Q9NYV6 651 aa32.72■■■□□ 2.83
NECTIN3-201ENST00000319792 FGF18O76093 207 aa32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 RPL17P18621 184 aaKnown RBP32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 CETN2P41208 172 aa32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 GPR15P49685 360 aa32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 DDR2Q16832 855 aa32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 CCDC50Q8IVM0 306 aa32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 VPS52Q8N1B4 723 aa32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 RAPGEF5Q92565 580 aa32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 HSFX1Q9UBD0 423 aa32.71■■■□□ 2.83
NECTIN3-201ENST00000319792 C3orf70A6NLC5 250 aaPredicted RBP32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 C2CD2LO14523 706 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 RARAP10276 462 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 SULT1E1P49888 294 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 KRT17Q04695 432 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 SMC1AQ14683 1233 aaKnown RBP32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 SIX1Q15475 284 aaPredicted RBP32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 BOLA3Q53S33 107 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 SYPL2Q5VXT5 272 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 SPOCD1Q6ZMY3 1216 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 MAIP1Q8WWC4 291 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 RNF25Q96BH1 459 aaPredicted RBP32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 ABHD8Q96I13 439 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 CEP295NLQ96MC4 621 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 OSBPL8Q9BZF1 889 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 FBXO44Q9H4M3 255 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 AFF4Q9UHB7 1163 aaKnown RBP32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 NAALADL1Q9UQQ1 740 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 SCML2Q9UQR0 700 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 NR2E1Q9Y466 385 aa32.7■■■□□ 2.83
NECTIN3-201ENST00000319792 GOLGA6L10A0A0M3HER8 536 aa32.69■■■□□ 2.82
NECTIN3-201ENST00000319792 TLL1O43897 1013 aa32.69■■■□□ 2.82
NECTIN3-201ENST00000319792 ABLIM3O94929 683 aa32.69■■■□□ 2.82
NECTIN3-201ENST00000319792 RPL10AP62906 217 aaKnown RBP32.69■■■□□ 2.82
NECTIN3-201ENST00000319792 PPP2R5EQ16537 467 aa32.69■■■□□ 2.82
NECTIN3-201ENST00000319792 TAZQ16635 292 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms