RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 NPR3P17342 541 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 PMLP29590 882 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ZNF235Q14590 738 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ERMARDQ5T6L9 678 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 CRELD2Q6UXH1 353 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 KATNAL2Q8IYT4 538 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ELMOD1Q8N336 334 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 TSEN2Q8NCE0 465 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 TFB1MQ8WVM0 346 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 NDRG1Q92597 394 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 CELF6Q96J87 481 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 YME1L1Q96TA2 773 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 CYTH2Q99418 400 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 APOL2Q9BQE5 337 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 DMAP1Q9NPF5 467 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 TCRBV7S2A1N4TA0A589 114 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 FBXO21O94952 628 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ETS1P14921 441 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ETFBP38117 255 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ALDH1A3P47895 512 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 COPS2P61201 443 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 SPARCL1Q14515 664 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 SDHAF4Q5VUM1 108 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ZC3H3Q8IXZ2 948 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ANKRD52Q8NB46 1076 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 SLC4A11Q8NBS3 891 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 NETO2Q8NC67 525 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 MDM1Q8TC05 714 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 IFT43Q96FT9 208 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 RPRD1AQ96P16 312 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 LPIN3Q9BQK8 851 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 TRPV6Q9H1D0 765 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ERVK-5Q9HDB9 667 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 ZFATQ9P243 1243 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 STK38LQ9Y2H1 464 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 MAP1BP46821 2468 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 COL24A1Q17RW2 1714 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 TMEM191CA6NGB0 347 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 PPEF2O14830 753 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 F2P00734 622 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 INHAP05111 366 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 KDELR1P24390 212 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 NXNQ6DKJ4 435 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 IPMKQ8NFU5 416 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 SKA2Q8WVK7 121 aaPredicted RBP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 TRABDQ9H4I3 376 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 CAPN7Q9Y6W3 813 aa9.66□□□□□ -0.86
TMEM39A-201ENST00000319172 LAMB2P55268 1798 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 LY75O60449 1722 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 WNK3Q9BYP7 1800 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 DNAJC25-GNG10A0A024R161 153 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 C3orf70A6NLC5 250 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 KCNK1O00180 336 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 HOXA2O43364 376 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 F9P00740 461 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 FLT3P36888 993 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 GHRHRQ02643 423 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 IL31Q6EBC2 164 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 NPNTQ6UXI9 565 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 LRIG3Q6UXM1 1119 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 PITPNM3Q9BZ71 974 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 DPEP3Q9H4B8 488 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 PIH1D1Q9NWS0 290 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 KIAA0100Q14667 2235 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 SLC12A8A0AV02 714 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 LTFP02788 710 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 ATXN8OSP0DMR3 200 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 RARGP13631 454 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 CCND3P30281 292 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 CLCNKBP51801 687 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 ZNF143P52747 638 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 ZC3H12AQ5D1E8 599 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 NOMO2Q5JPE7 1267 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 MON1BQ7L1V2 547 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 TMEM86AQ8N2M4 240 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 SNX27Q96L92 541 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 DDX20Q9UHI6 824 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 FIS1Q9Y3D6 152 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 NR2E1Q9Y466 385 aa9.65□□□□□ -0.86
TMEM39A-201ENST00000319172 E2F8A0AVK6 867 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 PMPCBO75439 489 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 LMO2P25791 158 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 SEC24CP53992 1094 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 HNRNPH2P55795 449 aaKnown RBP9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 C1orf220Q5T0J3 134 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 CDCA2Q69YH5 1023 aaPredicted RBP9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 AENQ8WTP8 325 aaKnown RBP9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 TWNKQ96RR1 684 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 UBP1Q9NZI7 540 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 WHRNQ9P202 907 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 GIT1Q9Y2X7 761 aa9.65□□□□□ -0.87
TMEM39A-201ENST00000319172 CCDC195A0A1B0GUA6 201 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 GMNCA6NCL1 334 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 DDX3YO15523 660 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 JCHAINP01591 159 aa9.64□□□□□ -0.87
TMEM39A-201ENST00000319172 CHN1P15882 459 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms