RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TMC5Q6UXY8 1006 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 HS6ST3Q8IZP7 471 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 MCRS1Q96EZ8 462 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 VCPIP1Q96JH7 1222 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 ZNF512Q96ME7 567 aaPredicted RBP16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 CORO1BQ9BR76 489 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 TSGA10Q9BZW7 698 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 NMUR1Q9HB89 426 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 OSER1Q9NX31 292 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 PATJQ8NI35 1801 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 A0A1W2PPC1 479 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 TCRBV5S1A1TA0A578 114 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 CAPN9O14815 690 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 PJA2O43164 708 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 PALMO75781 387 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 FTCDO95954 541 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 YWHAQP27348 245 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 GJC1P36383 396 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 SSR1P43307 286 aaKnown RBP16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 ZNF268Q14587 947 aaPredicted RBP16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 SYPL2Q5VXT5 272 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 BHLHA9Q7RTU4 235 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 DNAJB7Q7Z6W7 309 aaPredicted RBP16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 DAAM2Q86T65 1068 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 GPR65Q8IYL9 337 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 MRPL47Q9HD33 250 aaKnown RBP16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 PNPLA8Q9NP80 782 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 CNGB3Q9NQW8 809 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 INTUQ9ULD6 942 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 SCINQ9Y6U3 715 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 NCANO14594 1321 aa16.15■□□□□ 0.18
PDLIM5-202ENST00000318007 BUB1BO60566 1050 aaPredicted RBP16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 RPL34P49207 117 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 ATXN1P54253 815 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 SNX16P57768 344 aa16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 DUSP6Q16828 381 aa16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 ZNF569Q5MCW4 686 aa16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 PDE12Q6L8Q7 609 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 CCDC149Q6ZUS6 474 aa16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 DEFB106AQ8N104 65 aa16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 KHSRPQ92945 711 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■■■□ 20.4
PDLIM5-202ENST00000318007 LMAN2LQ9H0V9 348 aa16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 ZNF334Q9HCZ1 680 aaPredicted RBP16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 USP3Q9Y6I4 520 aa16.14■□□□□ 0.17
PDLIM5-202ENST00000318007 CCDC195A0A1B0GUA6 201 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 ESPNB1AK53 854 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 NRG2O14511 850 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 ENC1O14682 589 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 MDM4O15151 490 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 TBX18O95935 607 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 LTFP02788 710 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 PDGFRAP16234 1089 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 HMGA1P17096 107 aaKnown RBP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 PSMA2P25787 234 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 YWHAGP61981 247 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 YWHAZP63104 245 aaKnown RBP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 NTHL1P78549 312 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 ZNF252P-AS1Q0IIN9 211 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 HYAL1Q12794 435 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 BSPRYQ5W0U4 402 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 PPP1R2P3Q6NXS1 205 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 RHOT2Q8IXI1 618 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 RXFP2Q8WXD0 754 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 PPM1EQ8WY54 764 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 DOCK6Q96HP0 2047 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 SPATA17Q96L03 361 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 ADAM33Q9BZ11 813 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 NSUN3Q9H649 340 aaKnown RBP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 WDR35Q9P2L0 1181 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 ZNF638Q14966 1978 aaKnown RBP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 GRID2IPA4D2P6 1211 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 SIGLEC16A6NMB1 481 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 MYO1FO00160 1098 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 MYL4P12829 197 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 GNG11P61952 73 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 NME3Q13232 169 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 CCDC85BQ15834 202 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 PPP1R15BQ5SWA1 713 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 SMYD5Q6GMV2 418 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 RSRC2Q7L4I2 434 aaKnown RBP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 SCD5Q86SK9 330 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 TXLNBQ8N3L3 684 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 TPCN2Q8NHX9 752 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 ZNF592Q92610 1267 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 GOLGA1Q92805 767 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 PSMG2Q969U7 264 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 SLITRK1Q96PX8 696 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 PSMB7Q99436 277 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 UBXN6Q9BZV1 441 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 FBXO44Q9H4M3 255 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 TRPC7Q9HCX4 862 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 AVENQ9NQS1 362 aaPredicted RBP16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 CALCOCO1Q9P1Z2 691 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 TMEM59LQ9UK28 342 aa16.13■□□□□ 0.17
PDLIM5-202ENST00000318007 GREB1Q4ZG55 1949 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 TMEM191CA6NGB0 347 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 CCP110O43303 1012 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 NCK2O43639 380 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 FBXO21O94952 628 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 RTN3O95197 1032 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms