RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DMC1Q14565 340 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 DCAF17Q5H9S7 520 aaPredicted RBP18.75■□□□□ 0.59
TPM1-203ENST00000317516 BTBD8Q5XKL5 378 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 ANKRD40Q6AI12 368 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 RHBDF2Q6PJF5 856 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 CACNA2D4Q7Z3S7 1137 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 WHAMMQ8TF30 809 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 GAB3Q8WWW8 586 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 PNKPQ96T60 521 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 WDR87Q6ZQQ6 2873 aa18.75■□□□□ 0.59
TPM1-203ENST00000317516 AXIN1O15169 862 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 APBB3O95704 486 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 APODP05090 189 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 ADH5P11766 374 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 PXNP49023 591 aaPredicted RBP18.74■□□□□ 0.59
TPM1-203ENST00000317516 SLC8A3P57103 927 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 SPEM2Q0P670 501 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 RSPO4Q2I0M5 234 aaPredicted RBP18.74■□□□□ 0.59
TPM1-203ENST00000317516 ZNF394Q53GI3 561 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 NUDT18Q6ZVK8 323 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 DGLUCYQ7Z3D6 616 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 TADA2BQ86TJ2 420 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 EZH1Q92800 747 aaPredicted RBP18.74■□□□□ 0.59
TPM1-203ENST00000317516 SEMA4DQ92854 862 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 JAKMIP2Q96AA8 810 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 TMEM176AQ96HP8 235 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 DHTKD1Q96HY7 919 aaPredicted RBP18.74■□□□□ 0.59
TPM1-203ENST00000317516 ZFRQ96KR1 1074 aaKnown RBP18.74■□□□□ 0.59
TPM1-203ENST00000317516 DUSP16Q9BY84 665 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 METTL14Q9HCE5 456 aaKnown RBP18.74■□□□□ 0.59
TPM1-203ENST00000317516 CISHQ9NSE2 258 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 DLL3Q9NYJ7 618 aa18.74■□□□□ 0.59
TPM1-203ENST00000317516 ARMCX3Q9UH62 379 aaPredicted RBP18.74■□□□□ 0.59
TPM1-203ENST00000317516 ZNF638Q14966 1978 aaKnown RBP18.73■□□□□ 0.59
TPM1-203ENST00000317516 K7EQS6 105 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 SCAMP3O14828 347 aaKnown RBP18.73■□□□□ 0.59
TPM1-203ENST00000317516 PSEN1P49768 467 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 MRPS21P82921 87 aaKnown RBP18.73■□□□□ 0.59
TPM1-203ENST00000317516 C2orf27AQ580R0 203 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 LY6G5CQ5SRR4 150 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 PPP1R26Q5T8A7 1209 aaPredicted RBP18.73■□□□□ 0.59
TPM1-203ENST00000317516 FAM160A2Q8N612 972 aaPredicted RBP18.73■□□□□ 0.59
TPM1-203ENST00000317516 USP33Q8TEY7 942 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 LOXL4Q96JB6 756 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 HHIPQ96QV1 700 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 CYLDQ9NQC7 956 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 EBF1Q9UH73 591 aa18.73■□□□□ 0.59
TPM1-203ENST00000317516 LSM7Q9UK45 103 aaKnown RBP18.73■□□□□ 0.59
TPM1-203ENST00000317516 OBSL1O75147 1896 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 A0A0A0MRY4 1105 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 HHLA1C9JL84 531 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 KAT7O95251 611 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 TGM1P22735 817 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 GRIA2P42262 883 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 KIF11P52732 1056 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 SEC13P55735 322 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 YWHAEP62258 255 aaKnown RBP18.72■□□□□ 0.59
TPM1-203ENST00000317516 GAB4Q2WGN9 574 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 HSF5Q4G112 596 aaPredicted RBP18.72■□□□□ 0.59
TPM1-203ENST00000317516 KLHDC10Q6PID8 442 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 HTR3DQ70Z44 454 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 ZC3H3Q8IXZ2 948 aaKnown RBP18.72■□□□□ 0.59
TPM1-203ENST00000317516 TSTD1Q8NFU3 115 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 ERCC4Q92889 916 aaPredicted RBP18.72■□□□□ 0.59
TPM1-203ENST00000317516 CDK5RAP1Q96SZ6 601 aaKnown RBP18.72■□□□□ 0.59
TPM1-203ENST00000317516 UBXN6Q9BZV1 441 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 ARHGEF4Q9NR80 690 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 SPHK2Q9NRA0 654 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 DNMT3LQ9UJW3 386 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 CDV3Q9UKY7 258 aaKnown RBP18.72■□□□□ 0.59
TPM1-203ENST00000317516 COQ4Q9Y3A0 265 aa18.72■□□□□ 0.59
TPM1-203ENST00000317516 KIF26AQ9ULI4 1882 aaPredicted RBP18.71■□□□□ 0.59
TPM1-203ENST00000317516 PTPRDP23468 1912 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 TBX18O95935 607 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 IRF1P10914 325 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 RALAP11233 206 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 HOXC13P31276 330 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 TNFRSF4P43489 277 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 PLA2G4AP47712 749 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 SLC6A11P48066 632 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 PMS1P54277 932 aaKnown RBP18.71■□□□□ 0.59
TPM1-203ENST00000317516 CSRP2Q16527 193 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 CBWD6Q4V339 395 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 CBWD3Q5JTY5 395 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 CBWD5Q5RIA9 395 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 GPRIN1Q7Z2K8 1008 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 BBS7Q8IWZ6 715 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 TATDN2Q93075 761 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 CEP63Q96MT8 703 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 KLF16Q9BXK1 252 aaPredicted RBP18.71■□□□□ 0.59
TPM1-203ENST00000317516 PARD6AQ9NPB6 346 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 SEMA4GQ9NTN9 838 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 POLR3BQ9NW08 1133 aaPredicted RBP18.71■□□□□ 0.59
TPM1-203ENST00000317516 DEC1Q9P2X7 70 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 NAGPAQ9UK23 515 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 MMP17Q9ULZ9 603 aa18.71■□□□□ 0.59
TPM1-203ENST00000317516 GREB1Q4ZG55 1949 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 TBC1D3BA6NDS4 549 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 CYP26A1O43174 497 aa18.7■□□□□ 0.58
TPM1-203ENST00000317516 HOXC11O43248 304 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms