RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 OLIG2Q13516 323 aa7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 RSPO2Q6UXX9 243 aaPredicted RBP7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 MICALCLQ6ZW33 695 aa7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 PQLC3Q8N755 202 aa7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 PCDH19Q8TAB3 1148 aa7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 DHX35Q9H5Z1 703 aaKnown RBP7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 PIGVQ9NUD9 493 aa7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 TBC1D13Q9NVG8 400 aa7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 MTMR10Q9NXD2 777 aa7.32□□□□□ -1.24
LYSMD3-201ENST00000315948 PDCD11Q14690 1871 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 C9IYK1 514 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 F7P08709 466 aaPredicted RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 GOT1P17174 413 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 NPR3P17342 541 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 RPL17P18621 184 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 SDC4P31431 198 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 BCAT1P54687 386 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 NNTQ13423 1086 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 MSS51Q4VC12 460 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 FAM35AQ86V20 835 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 NIPA2Q8N8Q9 360 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 BCL7CQ8WUZ0 217 aaPredicted RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 TXLNGYQ9BZA5 131 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 GPR62Q9BZJ7 368 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 MSI1O43347 362 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 PRPSAP2O60256 369 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 RNF8O76064 485 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 KLRC2P26717 231 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 AARSP49588 968 aaKnown RBP eCLIP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 TUBB4BP68371 445 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 IFI35P80217 286 aaPredicted RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 CUL1Q13616 776 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 OASLQ15646 514 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 DDR2Q16832 855 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 LONRF1Q17RB8 773 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 RCOR2Q8IZ40 523 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 PLD5Q8N7P1 536 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 ATAD1Q8NBU5 361 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 MDM1Q8TC05 714 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 SPATA18Q8TC71 538 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 CNPY3Q9BT09 278 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 DUSP16Q9BY84 665 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 CRISPLD1Q9H336 500 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 SLC27A5Q9Y2P5 690 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 HSF2BPO75031 334 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 CAND2O75155 1236 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 AMPD1P23109 780 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 MAN1A1P33908 653 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 GUCY1A3Q02108 690 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 DHX34Q14147 1143 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 HSP90B2PQ58FF3 399 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 ARHGAP17Q68EM7 881 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 LRRC8DQ7L1W4 858 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 MRPL10Q7Z7H8 261 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 ANKMY2Q8IV38 441 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 FAM126BQ8IXS8 530 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 C12orf50Q8NA57 414 aaPredicted RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 DEPDC1BQ8WUY9 529 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 ART4Q93070 314 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 WDR83Q9BRX9 315 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 XPO7Q9UIA9 1087 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 MYO18AQ92614 2054 aaKnown RBP7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 RALGAPA2Q2PPJ7 1873 aa7.31□□□□□ -1.24
LYSMD3-201ENST00000315948 ARVCFO00192 962 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 CREB3O43889 395 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 WARSP23381 471 aaKnown RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 MCM3P25205 808 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 MNX1P50219 401 aaPredicted RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 NKX3-2P78367 333 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 RNASELQ05823 741 aaKnown RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 IZUMO3Q5VZ72 239 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 APBB1IPQ7Z5R6 666 aaPredicted RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 UNC93AQ86WB7 457 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 CMASQ8NFW8 434 aaPredicted RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 RSPH1Q8WYR4 309 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 KCTD15Q96SI1 283 aaPredicted RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 RAB17Q9H0T7 212 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 CDC42EP4Q9H3Q1 356 aaKnown RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 PCDH18Q9HCL0 1135 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 ABI2Q9NYB9 513 aaPredicted RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 TBK1Q9UHD2 729 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 GIT1Q9Y2X7 761 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 HHLA1C9JL84 531 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 M0QYT0 321 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 SCAMP3O14828 347 aaKnown RBP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 MDM4O15151 490 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 ATP8B1O43520 1251 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 HOXD10P28358 340 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 SULT1E1P49888 294 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 PMS2P54278 862 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 PCBP1Q15365 356 aaKnown RBP eCLIP7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 CCNG2Q16589 344 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 SLC39A12Q504Y0 691 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 BHLHA9Q7RTU4 235 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 CCDC13Q8IYE1 715 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 TOP6BLQ8N6T0 577 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 ATL2Q8NHH9 583 aa7.3□□□□□ -1.24
LYSMD3-201ENST00000315948 SLC7A14Q8TBB6 771 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms