RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 MIS12Q9H081 205 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 PDCL3Q9H2J4 239 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 NMUR1Q9HB89 426 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 TRPM5Q9NZQ8 1165 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 EPS15L1Q9UBC2 864 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 TJP2Q9UDY2 1190 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 CYTH4Q9UIA0 394 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 MUTYHQ9UIF7 546 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 NUDT5Q9UKK9 219 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 USTQ9Y2C2 406 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 NUMBLQ9Y6R0 609 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 UNC80Q8N2C7 3258 aa8.28□□□□□ -1.08
CDC42-201ENST00000315554 ZNF840PA6NDX5 716 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 LRRC53A6NM62 1247 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 SCAMP3O14828 347 aaKnown RBP8.27□□□□□ -1.09
CDC42-201ENST00000315554 MDM4O15151 490 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 NARSO43776 548 aaKnown RBP8.27□□□□□ -1.09
CDC42-201ENST00000315554 FGF19O95750 216 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 MMEP08473 750 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 SETSIPP0DME0 302 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 FCARP24071 287 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 KRT9P35527 623 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 GPD2P43304 727 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 PLA2G4AP47712 749 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 PDE6CP51160 858 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 GOLGA8FQ08AF8 430 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 GOLGA8DPQ0D2H9 430 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 HTR4Q13639 388 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 GRM2Q14416 872 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 STILQ15468 1287 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 E4F1Q66K89 784 aaPredicted RBP8.27□□□□□ -1.09
CDC42-201ENST00000315554 SCD5Q86SK9 330 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 MON1AQ86VX9 555 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 ARID3BQ8IVW6 561 aaPredicted RBP8.27□□□□□ -1.09
CDC42-201ENST00000315554 ZDHHC14Q8IZN3 488 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 SIX6OS1Q8N1H7 587 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 WDTC1Q8N5D0 677 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 SLC35F5Q8WV83 523 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 SMARCD2Q92925 531 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 SLITRK1Q96PX8 696 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 TASP1Q9H6P5 420 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 KCNK12Q9HB15 430 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 LRRC4Q9HBW1 653 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 SEPT11Q9NVA2 429 aaKnown RBP8.27□□□□□ -1.09
CDC42-201ENST00000315554 OSER1Q9NX31 292 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 SMPD4Q9NXE4 827 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 GDE1Q9NZC3 331 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 IL37Q9NZH6 218 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 NOCTQ9UK39 431 aaKnown RBP8.27□□□□□ -1.09
CDC42-201ENST00000315554 CCL26Q9Y258 94 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 MYH10P35580 1976 aa8.27□□□□□ -1.09
CDC42-201ENST00000315554 DOCK8Q8NF50 2099 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 TRAV19A0A0A6YYK7 116 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 LOC100996750A0A140TA64 210 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 CBFA2T2O43439 604 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 TBX18O95935 607 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 ZBED1O96006 694 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 CKMP06732 381 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 CHRNB2P17787 502 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 AVPR1AP37288 418 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 BPIFB4P59827 614 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 ASIC2Q16515 512 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 C2CD6Q53TS8 623 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 RAB41Q5JT25 222 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 HFE2Q6ZVN8 426 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 PHLDB2Q86SQ0 1253 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 CMTM8Q8IZV2 173 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 RIN3Q8TB24 985 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 DDX1Q92499 740 aaKnown RBP8.26□□□□□ -1.09
CDC42-201ENST00000315554 EDEM1Q92611 657 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 USP13Q92995 863 aaPredicted RBP8.26□□□□□ -1.09
CDC42-201ENST00000315554 CEP295NLQ96MC4 621 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 LRRC3BQ96PB8 259 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 PCDHB18PQ96TA0 734 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 EPAS1Q99814 870 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 TMUB1Q9BVT8 246 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 KRTAP4-6Q9BYQ5 205 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 TRIM5Q9C035 493 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 TTYH3Q9C0H2 523 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 RNF38Q9H0F5 515 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 FBXO44Q9H4M3 255 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 PNPLA8Q9NP80 782 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 EHD2Q9NZN4 543 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 NAGPAQ9UK23 515 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 SCML2Q9UQR0 700 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 USP3Q9Y6I4 520 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 GREB1Q4ZG55 1949 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 PATJQ8NI35 1801 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 TTC28Q96AY4 2481 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 FAM92AA1XBS5 289 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 YJEFN3A6XGL0 299 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 HEPACAM2A8MVW5 462 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 E5RJQ4 531 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 E7ENQ6 273 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 ANHXE9PGG2 379 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 DPYSL4O14531 572 aa8.26□□□□□ -1.09
CDC42-201ENST00000315554 COCHO43405 550 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms