RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 NOD1Q9Y239 953 aa19.17■□□□□ 0.66
CCDC43-201ENST00000315286 A0A0U1RQF3 1178 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 RASGRF2O14827 1237 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 RGS16O15492 202 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-201ENST00000315286 RBP3P10745 1247 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 ACLYP53396 1101 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 HNRNPH2P55795 449 aaKnown RBP19.16■□□□□ 0.66
CCDC43-201ENST00000315286 ADIGQ0VDE8 80 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 TFDP2Q14188 446 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 UPP1Q16831 310 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 DEFB115Q30KQ5 88 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 RNASEH2BQ5TBB1 312 aaKnown RBP19.16■□□□□ 0.66
CCDC43-201ENST00000315286 CROCCP2Q86T23 111 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 RNF180Q86T96 592 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 RELL1Q8IUW5 271 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 CD99L2Q8TCZ2 262 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 C9orf72Q96LT7 481 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 ADAM2Q99965 735 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 NCAPGQ9BPX3 1015 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 MED10Q9BTT4 135 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 FOXP3Q9BZS1 431 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 SLC12A6Q9UHW9 1150 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 MCF2LO15068 1137 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 MDM4O15151 490 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 POMCP01189 267 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 RPL9P32969 192 aaKnown RBP19.16■□□□□ 0.66
CCDC43-201ENST00000315286 SLC8A3P57103 927 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 IFI35P80217 286 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-201ENST00000315286 ADCY1Q08828 1119 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 MORF4L2Q15014 288 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 EFHC1Q5JVL4 640 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 CLEC20AQ6ZU45 233 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 B4GALNT4Q76KP1 1039 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 TMEM86AQ8N2M4 240 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 P3H4Q92791 437 aa19.16■□□□□ 0.66
CCDC43-201ENST00000315286 ROPN1BQ9BZX4 212 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-201ENST00000315286 ROPN1Q9HAT0 212 aaPredicted RBP19.16■□□□□ 0.66
CCDC43-201ENST00000315286 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.16■□□□□ 0.66
CCDC43-201ENST00000315286 TRPA1O75762 1119 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 RPL22P35268 128 aaKnown RBP19.15■□□□□ 0.66
CCDC43-201ENST00000315286 MAGEA4P43358 317 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 LHX1P48742 406 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 NDUFV1P49821 464 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 RAB27AP51159 221 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 AUHQ13825 339 aaKnown RBP19.15■□□□□ 0.66
CCDC43-201ENST00000315286 NOMO1Q15155 1222 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 LONRF1Q17RB8 773 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 TIGD5Q53EQ6 642 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 ANKRD20A8PQ5CZ79 823 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 ERMARDQ5T6L9 678 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 C1orf228Q6PIY5 440 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 ZC3H18Q86VM9 953 aaKnown RBP19.15■□□□□ 0.66
CCDC43-201ENST00000315286 PQLC3Q8N755 202 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 PLD5Q8N7P1 536 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 FAM71DQ8N9W8 422 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 PCDH19Q8TAB3 1148 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.15■□□□□ 0.66
CCDC43-201ENST00000315286 SYT15Q9BQS2 421 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 MAGEB5Q9BZ81 275 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 RABEP2Q9H5N1 569 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 TDRD15B5MCY1 1934 aaKnown RBP19.15■□□□□ 0.66
CCDC43-201ENST00000315286 MYBPHLA2RUH7 354 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 LSP1P33241 339 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 MAP3K7CLP57077 242 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 PPP6R3Q5H9R7 873 aaPredicted RBP19.15■□□□□ 0.66
CCDC43-201ENST00000315286 FAM26DQ5JW98 314 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 FOXR1Q6PIV2 292 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 DEFB106AQ8N104 65 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 CALCOCO1Q9P1Z2 691 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 PRDM4Q9UKN5 801 aa19.15■□□□□ 0.66
CCDC43-201ENST00000315286 FARP1Q9Y4F1 1045 aaPredicted RBP19.15■□□□□ 0.66
CCDC43-201ENST00000315286 I3L4J1 428 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 MATKP42679 507 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 CTCFP49711 727 aaPredicted RBP19.14■□□□□ 0.65
CCDC43-201ENST00000315286 RABGGTBP53611 331 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 NRLP54845 237 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 TNFAIP8L3Q5GJ75 292 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 KCTD13Q8WZ19 329 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 PRCCQ92733 491 aaPredicted RBP19.14■□□□□ 0.65
CCDC43-201ENST00000315286 FAM149B1Q96BN6 582 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 LRRC4Q9HBW1 653 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 SAYSD1Q9NPB0 183 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 KRT82Q9NSB4 513 aa19.14■□□□□ 0.65
CCDC43-201ENST00000315286 CAPN15O75808 1086 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 CABYRO75952 493 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 FAM200BP0CF97 657 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 HOXD10P28358 340 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 L1CAMP32004 1257 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 MRPS5P82675 430 aaKnown RBP19.13■□□□□ 0.65
CCDC43-201ENST00000315286 PAN2Q504Q3 1202 aaKnown RBP19.13■□□□□ 0.65
CCDC43-201ENST00000315286 DARS2Q6PI48 645 aaKnown RBP19.13■□□□□ 0.65
CCDC43-201ENST00000315286 CEP128Q6ZU80 1094 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 TAB3Q8N5C8 712 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-201ENST00000315286 CPT1BQ92523 772 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 PCED1BQ96HM7 432 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 SHOC2Q9UQ13 582 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 APOL1O14791 398 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 AGTP01019 485 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 ROR1Q01973 937 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 DPYSL2Q16555 572 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms