RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SMOQ99835 787 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 RTKNQ9BST9 563 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 METTL14Q9HCE5 456 aaKnown RBP13.4□□□□□ -0.26
CKS2-201ENST00000314355 PNPLA8Q9NP80 782 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 POLMQ9NP87 494 aaPredicted RBP13.4□□□□□ -0.26
CKS2-201ENST00000314355 IL37Q9NZH6 218 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 GMIPQ9P107 970 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 DEC1Q9P2X7 70 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 DENND4CQ5VZ89 1909 aa13.4□□□□□ -0.26
CKS2-201ENST00000314355 COL4A2P08572 1712 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 FAM92AA1XBS5 289 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 SLC16A3O15427 465 aaKnown RBP13.39□□□□□ -0.27
CKS2-201ENST00000314355 CILPO75339 1184 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 IRF1P10914 325 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 GBP1P32455 592 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 PRCPP42785 496 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 TNFRSF4P43489 277 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 PLA2G4AP47712 749 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 SRSF5Q13243 272 aaKnown RBP13.39□□□□□ -0.27
CKS2-201ENST00000314355 BYSLQ13895 437 aaKnown RBP13.39□□□□□ -0.27
CKS2-201ENST00000314355 CSRP2Q16527 193 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 EOGTQ5NDL2 527 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 C1orf220Q5T0J3 134 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 RHBDF2Q6PJF5 856 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 CLEC20AQ6ZU45 233 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 TRMT11Q7Z4G4 463 aaKnown RBP13.39□□□□□ -0.27
CKS2-201ENST00000314355 TTC30AQ86WT1 665 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 SMYD4Q8IYR2 804 aaPredicted RBP13.39□□□□□ -0.27
CKS2-201ENST00000314355 FMR1NBQ8N0W7 255 aaPredicted RBP13.39□□□□□ -0.27
CKS2-201ENST00000314355 ARHGAP18Q8N392 663 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 FAM160A2Q8N612 972 aaPredicted RBP13.39□□□□□ -0.27
CKS2-201ENST00000314355 TMEM176AQ96HP8 235 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 DUSP16Q9BY84 665 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 CCSER2Q9H7U1 834 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 ARHGEF4Q9NR80 690 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 SEMA4GQ9NTN9 838 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 HESX1Q9UBX0 185 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 ARMCX3Q9UH62 379 aaPredicted RBP13.39□□□□□ -0.27
CKS2-201ENST00000314355 DNMT3LQ9UJW3 386 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 NAGPAQ9UK23 515 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 SCML2Q9UQR0 700 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 ZNF510Q9Y2H8 683 aa13.39□□□□□ -0.27
CKS2-201ENST00000314355 BICDL2A1A5D9 508 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 BEST1O76090 585 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 KAT7O95251 611 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 CYP17A1P05093 508 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 ZDHHC11BP0C7U3 371 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 ZXDBP98169 803 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 AASDHQ4L235 1098 aaPredicted RBP13.38□□□□□ -0.27
CKS2-201ENST00000314355 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 LY6G5CQ5SRR4 150 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 PGBD3Q8N328 593 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 NETO1Q8TDF5 533 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 USP33Q8TEY7 942 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 DHTKD1Q96HY7 919 aaPredicted RBP13.38□□□□□ -0.27
CKS2-201ENST00000314355 HHIPQ96QV1 700 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 ARRDC1-AS1Q9H2J1 176 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 APOBEC3GQ9HC16 384 aaKnown RBP13.38□□□□□ -0.27
CKS2-201ENST00000314355 SPHK2Q9NRA0 654 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 TMEM30AQ9NV96 361 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 DLL3Q9NYJ7 618 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 BCCIPQ9P287 314 aaKnown RBP eCLIP13.38□□□□□ -0.27
CKS2-201ENST00000314355 WDR35Q9P2L0 1181 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 HMGXB4Q9UGU5 601 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 EBF1Q9UH73 591 aa13.38□□□□□ -0.27
CKS2-201ENST00000314355 K7EQS6 105 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 SCAMP3O14828 347 aaKnown RBP13.37□□□□□ -0.27
CKS2-201ENST00000314355 RARGP13631 454 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 TBXAS1P24557 533 aaPredicted RBP13.37□□□□□ -0.27
CKS2-201ENST00000314355 TIE1P35590 1138 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 OPRD1P41143 372 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 SLC6A11P48066 632 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 COG7P83436 770 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 C10orf120Q5SQS8 335 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 PPP1R26Q5T8A7 1209 aaPredicted RBP13.37□□□□□ -0.27
CKS2-201ENST00000314355 ANKRD40Q6AI12 368 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 IL31Q6EBC2 164 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 PKN3Q6P5Z2 889 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 PRR23CQ6ZRP0 262 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 HTR3DQ70Z44 454 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 RSRC2Q7L4I2 434 aaKnown RBP13.37□□□□□ -0.27
CKS2-201ENST00000314355 ELOA2Q8IYF1 753 aaPredicted RBP13.37□□□□□ -0.27
CKS2-201ENST00000314355 CCDC33Q8N5R6 958 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 NAT16Q8N8M0 369 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 ZMIZ2Q8NF64 920 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 KCNV2Q8TDN2 545 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 DDX1Q92499 740 aaKnown RBP13.37□□□□□ -0.27
CKS2-201ENST00000314355 UBXN6Q9BZV1 441 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 DCLK3Q9C098 648 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 CYLDQ9NQC7 956 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 CISHQ9NSE2 258 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 C2orf42Q9NWW7 574 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 STRIP2Q9ULQ0 834 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
CKS2-201ENST00000314355 MMP17Q9ULZ9 603 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 PCDHGA5Q9Y5G8 931 aa13.37□□□□□ -0.27
CKS2-201ENST00000314355 KIF26AQ9ULI4 1882 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms